Gene : Eucgr.D02531 E. grandis v2.0
Defline:  (1 of 1) PF05615 - Tho complex subunit 7 (THOC7) Genomic Order:  2109
Name:  ? Eucgr.D02531 Secondary Identifier:  ? PAC:32050566
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D02531 0.5kb upstream 0.5kb upstream 3023 true Chr04: 39246349-39249371 Eucalyptus grandis
Eucgr.D02531 0.5kb upstream 0.5kb upstream 500 false Chr04: 39248872-39249371 Eucalyptus grandis
Eucgr.D02531 0.5kb downstream 0.5kb downstream 3023 true Chr04: 39245849-39248871 Eucalyptus grandis
Eucgr.D02531 0.5kb downstream 0.5kb downstream 500 false Chr04: 39245849-39246348 Eucalyptus grandis
Eucgr.D02531 1.0kb upstream 1.0kb upstream 3523 true Chr04: 39246349-39249871 Eucalyptus grandis
Eucgr.D02531 1.0kb upstream 1.0kb upstream 1000 false Chr04: 39248872-39249871 Eucalyptus grandis
Eucgr.D02531 1.0kb downstream 1.0kb downstream 3523 true Chr04: 39245349-39248871 Eucalyptus grandis
Eucgr.D02531 1.0kb downstream 1.0kb downstream 1000 false Chr04: 39245349-39246348 Eucalyptus grandis
Eucgr.D02531 2.0kb upstream 2.0kb upstream 4523 true Chr04: 39246349-39250871 Eucalyptus grandis
Eucgr.D02531 2.0kb upstream 2.0kb upstream 2000 false Chr04: 39248872-39250871 Eucalyptus grandis
Eucgr.D02531 2.0kb downstream 2.0kb downstream 4523 true Chr04: 39244349-39248871 Eucalyptus grandis
Eucgr.D02531 2.0kb downstream 2.0kb downstream 2000 false Chr04: 39244349-39246348 Eucalyptus grandis
Eucgr.D02531 5.0kb upstream 5.0kb upstream 7523 true Chr04: 39246349-39253871 Eucalyptus grandis
Eucgr.D02531 5.0kb upstream 5.0kb upstream 5000 false Chr04: 39248872-39253871 Eucalyptus grandis
Eucgr.D02531 5.0kb downstream 5.0kb downstream 7523 true Chr04: 39241349-39248871 Eucalyptus grandis
Eucgr.D02531 5.0kb downstream 5.0kb downstream 5000 false Chr04: 39241349-39246348 Eucalyptus grandis
Eucgr.D02531 10.0kb upstream 10.0kb upstream 12523 true Chr04: 39246349-39258871 Eucalyptus grandis
Eucgr.D02531 10.0kb upstream 10.0kb upstream 10000 false Chr04: 39248872-39258871 Eucalyptus grandis
Eucgr.D02531 10.0kb downstream 10.0kb downstream 12523 true Chr04: 39236349-39248871 Eucalyptus grandis
Eucgr.D02531 10.0kb downstream 10.0kb downstream 10000 false Chr04: 39236349-39246348 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069110 5270 Rosid View MSA
123737920 5271 Pentapetalae View MSA
122791766 5272 Eudicot View MSA
122047726 5273 Angiosperm View MSA
121351339 5274 Embryophyte View MSA
123428544 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.5612 0.0 22.7071    
cufflinks 6.43123 0.0 15.9333   Low
cufflinks 8.70978 0.0 20.822    
cufflinks 13.7873 0.0 38.796   High
cufflinks 15.0085 0.0 35.8326   High
cufflinks 6.23079 0.0 15.865   Low

0 Strain