Gene : Eucgr.D02312 E. grandis v2.0
Defline:  (1 of 50) PF12819 - Carbohydrate-binding protein of the ER (Malectin_like) Genomic Order:  1915
Name:  ? Eucgr.D02312 Secondary Identifier:  ? PAC:32049477
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D02312 0.5kb upstream 0.5kb upstream 2393 true Chr04: 36406169-36408561 Eucalyptus grandis
Eucgr.D02312 0.5kb upstream 0.5kb upstream 500 false Chr04: 36408062-36408561 Eucalyptus grandis
Eucgr.D02312 0.5kb downstream 0.5kb downstream 2393 true Chr04: 36405669-36408061 Eucalyptus grandis
Eucgr.D02312 0.5kb downstream 0.5kb downstream 500 false Chr04: 36405669-36406168 Eucalyptus grandis
Eucgr.D02312 1.0kb upstream 1.0kb upstream 2893 true Chr04: 36406169-36409061 Eucalyptus grandis
Eucgr.D02312 1.0kb upstream 1.0kb upstream 1000 false Chr04: 36408062-36409061 Eucalyptus grandis
Eucgr.D02312 1.0kb downstream 1.0kb downstream 2893 true Chr04: 36405169-36408061 Eucalyptus grandis
Eucgr.D02312 1.0kb downstream 1.0kb downstream 1000 false Chr04: 36405169-36406168 Eucalyptus grandis
Eucgr.D02312 2.0kb upstream 2.0kb upstream 3893 true Chr04: 36406169-36410061 Eucalyptus grandis
Eucgr.D02312 2.0kb upstream 2.0kb upstream 2000 false Chr04: 36408062-36410061 Eucalyptus grandis
Eucgr.D02312 2.0kb downstream 2.0kb downstream 3893 true Chr04: 36404169-36408061 Eucalyptus grandis
Eucgr.D02312 2.0kb downstream 2.0kb downstream 2000 false Chr04: 36404169-36406168 Eucalyptus grandis
Eucgr.D02312 5.0kb upstream 5.0kb upstream 6893 true Chr04: 36406169-36413061 Eucalyptus grandis
Eucgr.D02312 5.0kb upstream 5.0kb upstream 5000 false Chr04: 36408062-36413061 Eucalyptus grandis
Eucgr.D02312 5.0kb downstream 5.0kb downstream 6893 true Chr04: 36401169-36408061 Eucalyptus grandis
Eucgr.D02312 5.0kb downstream 5.0kb downstream 5000 false Chr04: 36401169-36406168 Eucalyptus grandis
Eucgr.D02312 10.0kb upstream 10.0kb upstream 11893 true Chr04: 36406169-36418061 Eucalyptus grandis
Eucgr.D02312 10.0kb upstream 10.0kb upstream 10000 false Chr04: 36408062-36418061 Eucalyptus grandis
Eucgr.D02312 10.0kb downstream 10.0kb downstream 11893 true Chr04: 36396169-36408061 Eucalyptus grandis
Eucgr.D02312 10.0kb downstream 10.0kb downstream 10000 false Chr04: 36396169-36406168 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029251 5273 Angiosperm View MSA
124073615 5270 Rosid View MSA
123753524 5271 Pentapetalae View MSA
122786120 5272 Eudicot View MSA
121346841 5274 Embryophyte View MSA
123380454 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 43.7294 0.0 96.9647 High  
cufflinks 31.6552 0.0 70.0038 High Low
cufflinks 123.325 0.0 290.791 High  
cufflinks 40.1165 0.0 88.9355 High  
cufflinks 189.687 0.0 468.114 High High
cufflinks 130.888 0.0 308.641 High  

0 Strain