Gene : Eucgr.E00259 E. grandis v2.0
Defline:  (1 of 2) PTHR10788:SF48 - ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6 Genomic Order:  234
Name:  ? Eucgr.E00259 Secondary Identifier:  ? PAC:32030306
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00259 0.5kb upstream 0.5kb upstream 5746 true Chr05: 2523221-2528966 Eucalyptus grandis
Eucgr.E00259 0.5kb upstream 0.5kb upstream 500 false Chr05: 2523221-2523720 Eucalyptus grandis
Eucgr.E00259 0.5kb downstream 0.5kb downstream 5746 true Chr05: 2523721-2529466 Eucalyptus grandis
Eucgr.E00259 0.5kb downstream 0.5kb downstream 500 false Chr05: 2528967-2529466 Eucalyptus grandis
Eucgr.E00259 1.0kb upstream 1.0kb upstream 6246 true Chr05: 2522721-2528966 Eucalyptus grandis
Eucgr.E00259 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2522721-2523720 Eucalyptus grandis
Eucgr.E00259 1.0kb downstream 1.0kb downstream 6246 true Chr05: 2523721-2529966 Eucalyptus grandis
Eucgr.E00259 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2528967-2529966 Eucalyptus grandis
Eucgr.E00259 2.0kb upstream 2.0kb upstream 7246 true Chr05: 2521721-2528966 Eucalyptus grandis
Eucgr.E00259 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2521721-2523720 Eucalyptus grandis
Eucgr.E00259 2.0kb downstream 2.0kb downstream 7246 true Chr05: 2523721-2530966 Eucalyptus grandis
Eucgr.E00259 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2528967-2530966 Eucalyptus grandis
Eucgr.E00259 5.0kb upstream 5.0kb upstream 10246 true Chr05: 2518721-2528966 Eucalyptus grandis
Eucgr.E00259 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2518721-2523720 Eucalyptus grandis
Eucgr.E00259 5.0kb downstream 5.0kb downstream 10246 true Chr05: 2523721-2533966 Eucalyptus grandis
Eucgr.E00259 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2528967-2533966 Eucalyptus grandis
Eucgr.E00259 10.0kb upstream 10.0kb upstream 15246 true Chr05: 2513721-2528966 Eucalyptus grandis
Eucgr.E00259 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2513721-2523720 Eucalyptus grandis
Eucgr.E00259 10.0kb downstream 10.0kb downstream 15246 true Chr05: 2523721-2538966 Eucalyptus grandis
Eucgr.E00259 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2528967-2538966 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065335 5270 Rosid View MSA
123751102 5271 Pentapetalae View MSA
122786361 5272 Eudicot View MSA
122049755 5273 Angiosperm View MSA
121348711 5274 Embryophyte View MSA
123425695 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.28445 0.0 15.4744   Low
cufflinks 21.4079 0.0 48.8855    
cufflinks 9.16623 0.0 21.0362    
cufflinks 20.1109 0.0 49.8462    
cufflinks 23.3483 0.0 53.263    
cufflinks 11.7966 0.0 26.6382    

0 Strain