Gene : Eucgr.E00173 E. grandis v2.0
Defline:  (1 of 2) PF02137 - Adenosine-deaminase (editase) domain (A_deamin) Genomic Order:  157
Name:  ? Eucgr.E00173 Secondary Identifier:  ? PAC:32028070
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00173 0.5kb upstream 0.5kb upstream 3640 true Chr05: 1794511-1798150 Eucalyptus grandis
Eucgr.E00173 0.5kb upstream 0.5kb upstream 500 false Chr05: 1797651-1798150 Eucalyptus grandis
Eucgr.E00173 0.5kb downstream 0.5kb downstream 3640 true Chr05: 1794011-1797650 Eucalyptus grandis
Eucgr.E00173 0.5kb downstream 0.5kb downstream 500 false Chr05: 1794011-1794510 Eucalyptus grandis
Eucgr.E00173 1.0kb upstream 1.0kb upstream 4140 true Chr05: 1794511-1798650 Eucalyptus grandis
Eucgr.E00173 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1797651-1798650 Eucalyptus grandis
Eucgr.E00173 1.0kb downstream 1.0kb downstream 4140 true Chr05: 1793511-1797650 Eucalyptus grandis
Eucgr.E00173 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1793511-1794510 Eucalyptus grandis
Eucgr.E00173 2.0kb upstream 2.0kb upstream 5140 true Chr05: 1794511-1799650 Eucalyptus grandis
Eucgr.E00173 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1797651-1799650 Eucalyptus grandis
Eucgr.E00173 2.0kb downstream 2.0kb downstream 5140 true Chr05: 1792511-1797650 Eucalyptus grandis
Eucgr.E00173 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1792511-1794510 Eucalyptus grandis
Eucgr.E00173 5.0kb upstream 5.0kb upstream 8140 true Chr05: 1794511-1802650 Eucalyptus grandis
Eucgr.E00173 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1797651-1802650 Eucalyptus grandis
Eucgr.E00173 5.0kb downstream 5.0kb downstream 8140 true Chr05: 1789511-1797650 Eucalyptus grandis
Eucgr.E00173 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1789511-1794510 Eucalyptus grandis
Eucgr.E00173 10.0kb upstream 10.0kb upstream 13140 true Chr05: 1794511-1807650 Eucalyptus grandis
Eucgr.E00173 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1797651-1807650 Eucalyptus grandis
Eucgr.E00173 10.0kb downstream 10.0kb downstream 13140 true Chr05: 1784511-1797650 Eucalyptus grandis
Eucgr.E00173 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1784511-1794510 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068273 5270 Rosid View MSA
123741419 5271 Pentapetalae View MSA
122786096 5272 Eudicot View MSA
122043164 5273 Angiosperm View MSA
121346845 5274 Embryophyte View MSA
123424595 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.7362 0.0 27.3946    
cufflinks 16.5778 0.0 37.7157    
cufflinks 9.71157 0.0 23.0742   Low
cufflinks 14.0394 0.0 32.3208    
cufflinks 24.0248 0.0 53.6883   High
cufflinks 14.2822 0.0 32.8287    

0 Strain