Gene : Eucgr.E00168 E. grandis v2.0
Defline:  (1 of 10) 2.4.2.26 - Protein xylosyltransferase / Uridine diphosphoxylose-protein xylosyltransferase Genomic Order:  153
Name:  ? Eucgr.E00168 Secondary Identifier:  ? PAC:32028562
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00168 0.5kb upstream 0.5kb upstream 4132 true Chr05: 1752719-1756850 Eucalyptus grandis
Eucgr.E00168 0.5kb upstream 0.5kb upstream 500 false Chr05: 1756351-1756850 Eucalyptus grandis
Eucgr.E00168 0.5kb downstream 0.5kb downstream 4132 true Chr05: 1752219-1756350 Eucalyptus grandis
Eucgr.E00168 0.5kb downstream 0.5kb downstream 500 false Chr05: 1752219-1752718 Eucalyptus grandis
Eucgr.E00168 1.0kb upstream 1.0kb upstream 4632 true Chr05: 1752719-1757350 Eucalyptus grandis
Eucgr.E00168 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1756351-1757350 Eucalyptus grandis
Eucgr.E00168 1.0kb downstream 1.0kb downstream 4632 true Chr05: 1751719-1756350 Eucalyptus grandis
Eucgr.E00168 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1751719-1752718 Eucalyptus grandis
Eucgr.E00168 2.0kb upstream 2.0kb upstream 5632 true Chr05: 1752719-1758350 Eucalyptus grandis
Eucgr.E00168 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1756351-1758350 Eucalyptus grandis
Eucgr.E00168 2.0kb downstream 2.0kb downstream 5632 true Chr05: 1750719-1756350 Eucalyptus grandis
Eucgr.E00168 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1750719-1752718 Eucalyptus grandis
Eucgr.E00168 5.0kb upstream 5.0kb upstream 8632 true Chr05: 1752719-1761350 Eucalyptus grandis
Eucgr.E00168 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1756351-1761350 Eucalyptus grandis
Eucgr.E00168 5.0kb downstream 5.0kb downstream 8632 true Chr05: 1747719-1756350 Eucalyptus grandis
Eucgr.E00168 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1747719-1752718 Eucalyptus grandis
Eucgr.E00168 10.0kb upstream 10.0kb upstream 13632 true Chr05: 1752719-1766350 Eucalyptus grandis
Eucgr.E00168 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1756351-1766350 Eucalyptus grandis
Eucgr.E00168 10.0kb downstream 10.0kb downstream 13632 true Chr05: 1742719-1756350 Eucalyptus grandis
Eucgr.E00168 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1742719-1752718 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070234 5270 Rosid View MSA
123741378 5271 Pentapetalae View MSA
122770039 5272 Eudicot View MSA
122044328 5273 Angiosperm View MSA
121310279 5274 Embryophyte View MSA
123428833 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.01367 0.0 9.72298    
cufflinks 0.560583 0.0 1.65891 Low  
cufflinks 3.31694 0.0 8.20479    
cufflinks 0.174068 0.0 0.597707 Low Low
cufflinks 3.00734 0.0 7.49003    
cufflinks 9.19537 0.0 20.7957   High

0 Strain