Gene : Eucgr.E00157 E. grandis v2.0
Defline:  (1 of 1) PF01062 - Bestrophin, RFP-TM, chloride channel (Bestrophin) Genomic Order:  143
Name:  ? Eucgr.E00157 Secondary Identifier:  ? PAC:32031463
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00157 0.5kb upstream 0.5kb upstream 3251 true Chr05: 1697262-1700512 Eucalyptus grandis
Eucgr.E00157 0.5kb upstream 0.5kb upstream 500 false Chr05: 1700013-1700512 Eucalyptus grandis
Eucgr.E00157 0.5kb downstream 0.5kb downstream 3251 true Chr05: 1696762-1700012 Eucalyptus grandis
Eucgr.E00157 0.5kb downstream 0.5kb downstream 500 false Chr05: 1696762-1697261 Eucalyptus grandis
Eucgr.E00157 1.0kb upstream 1.0kb upstream 3751 true Chr05: 1697262-1701012 Eucalyptus grandis
Eucgr.E00157 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1700013-1701012 Eucalyptus grandis
Eucgr.E00157 1.0kb downstream 1.0kb downstream 3751 true Chr05: 1696262-1700012 Eucalyptus grandis
Eucgr.E00157 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1696262-1697261 Eucalyptus grandis
Eucgr.E00157 2.0kb upstream 2.0kb upstream 4751 true Chr05: 1697262-1702012 Eucalyptus grandis
Eucgr.E00157 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1700013-1702012 Eucalyptus grandis
Eucgr.E00157 2.0kb downstream 2.0kb downstream 4751 true Chr05: 1695262-1700012 Eucalyptus grandis
Eucgr.E00157 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1695262-1697261 Eucalyptus grandis
Eucgr.E00157 5.0kb upstream 5.0kb upstream 7751 true Chr05: 1697262-1705012 Eucalyptus grandis
Eucgr.E00157 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1700013-1705012 Eucalyptus grandis
Eucgr.E00157 5.0kb downstream 5.0kb downstream 7751 true Chr05: 1692262-1700012 Eucalyptus grandis
Eucgr.E00157 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1692262-1697261 Eucalyptus grandis
Eucgr.E00157 10.0kb upstream 10.0kb upstream 12751 true Chr05: 1697262-1710012 Eucalyptus grandis
Eucgr.E00157 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1700013-1710012 Eucalyptus grandis
Eucgr.E00157 10.0kb downstream 10.0kb downstream 12751 true Chr05: 1687262-1700012 Eucalyptus grandis
Eucgr.E00157 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1687262-1697261 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066850 5270 Rosid View MSA
123736824 5271 Pentapetalae View MSA
122787113 5272 Eudicot View MSA
122051206 5273 Angiosperm View MSA
121349752 5274 Embryophyte View MSA
123427884 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.976516 0.0 3.44991    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.54183 0.0 4.95618    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 7.31577 0.0 25.6798   High

0 Strain