Gene : Eucgr.E00108 E. grandis v2.0
Defline:  (1 of 2) PTHR11972:SF41 - FERRIC REDUCTION OXIDASE 2-RELATED Genomic Order:  102
Name:  ? Eucgr.E00108 Secondary Identifier:  ? PAC:32031489
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5934 Eucalyptus grandis pathologic  
Egrandis PWY-6854 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00108 0.5kb upstream 0.5kb upstream 4950 true Chr05: 974512-979461 Eucalyptus grandis
Eucgr.E00108 0.5kb upstream 0.5kb upstream 500 false Chr05: 974512-975011 Eucalyptus grandis
Eucgr.E00108 0.5kb downstream 0.5kb downstream 4950 true Chr05: 975012-979961 Eucalyptus grandis
Eucgr.E00108 0.5kb downstream 0.5kb downstream 500 false Chr05: 979462-979961 Eucalyptus grandis
Eucgr.E00108 1.0kb upstream 1.0kb upstream 5450 true Chr05: 974012-979461 Eucalyptus grandis
Eucgr.E00108 1.0kb upstream 1.0kb upstream 1000 false Chr05: 974012-975011 Eucalyptus grandis
Eucgr.E00108 1.0kb downstream 1.0kb downstream 5450 true Chr05: 975012-980461 Eucalyptus grandis
Eucgr.E00108 1.0kb downstream 1.0kb downstream 1000 false Chr05: 979462-980461 Eucalyptus grandis
Eucgr.E00108 2.0kb upstream 2.0kb upstream 6450 true Chr05: 973012-979461 Eucalyptus grandis
Eucgr.E00108 2.0kb upstream 2.0kb upstream 2000 false Chr05: 973012-975011 Eucalyptus grandis
Eucgr.E00108 2.0kb downstream 2.0kb downstream 6450 true Chr05: 975012-981461 Eucalyptus grandis
Eucgr.E00108 2.0kb downstream 2.0kb downstream 2000 false Chr05: 979462-981461 Eucalyptus grandis
Eucgr.E00108 5.0kb upstream 5.0kb upstream 9450 true Chr05: 970012-979461 Eucalyptus grandis
Eucgr.E00108 5.0kb upstream 5.0kb upstream 5000 false Chr05: 970012-975011 Eucalyptus grandis
Eucgr.E00108 5.0kb downstream 5.0kb downstream 9450 true Chr05: 975012-984461 Eucalyptus grandis
Eucgr.E00108 5.0kb downstream 5.0kb downstream 5000 false Chr05: 979462-984461 Eucalyptus grandis
Eucgr.E00108 10.0kb upstream 10.0kb upstream 14450 true Chr05: 965012-979461 Eucalyptus grandis
Eucgr.E00108 10.0kb upstream 10.0kb upstream 10000 false Chr05: 965012-975011 Eucalyptus grandis
Eucgr.E00108 10.0kb downstream 10.0kb downstream 14450 true Chr05: 975012-989461 Eucalyptus grandis
Eucgr.E00108 10.0kb downstream 10.0kb downstream 10000 false Chr05: 979462-989461 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071281 5270 Rosid View MSA
123746738 5271 Pentapetalae View MSA
122787767 5272 Eudicot View MSA
122051677 5273 Angiosperm View MSA
121345980 5274 Embryophyte View MSA
123428579 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.10072 0.0 3.16291    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.43482 0.0 1.40215    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0175901 0.0 0.139648 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain