Gene : Eucgr.E00068 E. grandis v2.0
Defline:  (1 of 2) PTHR11177:SF167 - RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC Genomic Order:  63
Name:  ? Eucgr.E00068 Secondary Identifier:  ? PAC:32031288
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00068 0.5kb upstream 0.5kb upstream 4746 true Chr05: 645957-650702 Eucalyptus grandis
Eucgr.E00068 0.5kb upstream 0.5kb upstream 500 false Chr05: 645957-646456 Eucalyptus grandis
Eucgr.E00068 0.5kb downstream 0.5kb downstream 4746 true Chr05: 646457-651202 Eucalyptus grandis
Eucgr.E00068 0.5kb downstream 0.5kb downstream 500 false Chr05: 650703-651202 Eucalyptus grandis
Eucgr.E00068 1.0kb upstream 1.0kb upstream 5246 true Chr05: 645457-650702 Eucalyptus grandis
Eucgr.E00068 1.0kb upstream 1.0kb upstream 1000 false Chr05: 645457-646456 Eucalyptus grandis
Eucgr.E00068 1.0kb downstream 1.0kb downstream 5246 true Chr05: 646457-651702 Eucalyptus grandis
Eucgr.E00068 1.0kb downstream 1.0kb downstream 1000 false Chr05: 650703-651702 Eucalyptus grandis
Eucgr.E00068 2.0kb upstream 2.0kb upstream 6246 true Chr05: 644457-650702 Eucalyptus grandis
Eucgr.E00068 2.0kb upstream 2.0kb upstream 2000 false Chr05: 644457-646456 Eucalyptus grandis
Eucgr.E00068 2.0kb downstream 2.0kb downstream 6246 true Chr05: 646457-652702 Eucalyptus grandis
Eucgr.E00068 2.0kb downstream 2.0kb downstream 2000 false Chr05: 650703-652702 Eucalyptus grandis
Eucgr.E00068 5.0kb upstream 5.0kb upstream 9246 true Chr05: 641457-650702 Eucalyptus grandis
Eucgr.E00068 5.0kb upstream 5.0kb upstream 5000 false Chr05: 641457-646456 Eucalyptus grandis
Eucgr.E00068 5.0kb downstream 5.0kb downstream 9246 true Chr05: 646457-655702 Eucalyptus grandis
Eucgr.E00068 5.0kb downstream 5.0kb downstream 5000 false Chr05: 650703-655702 Eucalyptus grandis
Eucgr.E00068 10.0kb upstream 10.0kb upstream 14246 true Chr05: 636457-650702 Eucalyptus grandis
Eucgr.E00068 10.0kb upstream 10.0kb upstream 10000 false Chr05: 636457-646456 Eucalyptus grandis
Eucgr.E00068 10.0kb downstream 10.0kb downstream 14246 true Chr05: 646457-660702 Eucalyptus grandis
Eucgr.E00068 10.0kb downstream 10.0kb downstream 10000 false Chr05: 650703-660702 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066431 5270 Rosid View MSA
123750921 5271 Pentapetalae View MSA
122791613 5272 Eudicot View MSA
122044286 5273 Angiosperm View MSA
121344422 5274 Embryophyte View MSA
123425945 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.1595 0.0 64.4858 High  
cufflinks 16.3798 0.0 36.5013    
cufflinks 27.1041 0.0 59.9406 High  
cufflinks 11.9198 0.0 26.9351   Low
cufflinks 21.1193 0.0 46.81    
cufflinks 63.3907 0.0 142.809 High High

0 Strain