Gene : Eucgr.L00168 E. grandis v2.0
Defline:  (1 of 20) PF03101//PF04434//PF10551 - FAR1 DNA-binding domain (FAR1) // SWIM zinc finger (SWIM) // MULE transposase domain (MULE) Genomic Order:  941
Name:  ? Eucgr.L00168 Secondary Identifier:  ? PAC:32051095
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L00168 0.5kb upstream 0.5kb upstream 3643 true Chr04: 20542469-20546111 Eucalyptus grandis
Eucgr.L00168 0.5kb upstream 0.5kb upstream 500 false Chr04: 20542469-20542968 Eucalyptus grandis
Eucgr.L00168 0.5kb downstream 0.5kb downstream 3643 true Chr04: 20542969-20546611 Eucalyptus grandis
Eucgr.L00168 0.5kb downstream 0.5kb downstream 500 false Chr04: 20546112-20546611 Eucalyptus grandis
Eucgr.L00168 1.0kb upstream 1.0kb upstream 4143 true Chr04: 20541969-20546111 Eucalyptus grandis
Eucgr.L00168 1.0kb upstream 1.0kb upstream 1000 false Chr04: 20541969-20542968 Eucalyptus grandis
Eucgr.L00168 1.0kb downstream 1.0kb downstream 4143 true Chr04: 20542969-20547111 Eucalyptus grandis
Eucgr.L00168 1.0kb downstream 1.0kb downstream 1000 false Chr04: 20546112-20547111 Eucalyptus grandis
Eucgr.L00168 2.0kb upstream 2.0kb upstream 5143 true Chr04: 20540969-20546111 Eucalyptus grandis
Eucgr.L00168 2.0kb upstream 2.0kb upstream 2000 false Chr04: 20540969-20542968 Eucalyptus grandis
Eucgr.L00168 2.0kb downstream 2.0kb downstream 5143 true Chr04: 20542969-20548111 Eucalyptus grandis
Eucgr.L00168 2.0kb downstream 2.0kb downstream 2000 false Chr04: 20546112-20548111 Eucalyptus grandis
Eucgr.L00168 5.0kb upstream 5.0kb upstream 8143 true Chr04: 20537969-20546111 Eucalyptus grandis
Eucgr.L00168 5.0kb upstream 5.0kb upstream 5000 false Chr04: 20537969-20542968 Eucalyptus grandis
Eucgr.L00168 5.0kb downstream 5.0kb downstream 8143 true Chr04: 20542969-20551111 Eucalyptus grandis
Eucgr.L00168 5.0kb downstream 5.0kb downstream 5000 false Chr04: 20546112-20551111 Eucalyptus grandis
Eucgr.L00168 10.0kb upstream 10.0kb upstream 13143 true Chr04: 20532969-20546111 Eucalyptus grandis
Eucgr.L00168 10.0kb upstream 10.0kb upstream 10000 false Chr04: 20532969-20542968 Eucalyptus grandis
Eucgr.L00168 10.0kb downstream 10.0kb downstream 13143 true Chr04: 20542969-20556111 Eucalyptus grandis
Eucgr.L00168 10.0kb downstream 10.0kb downstream 10000 false Chr04: 20546112-20556111 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069988 5270 Rosid View MSA
123752178 5271 Pentapetalae View MSA
122796628 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.257108 0.0 0.839422 Low  
cufflinks 0.520137 0.0 1.53922 Low High
cufflinks 0.140442 0.0 0.494129 Low Low
cufflinks 0.161412 0.0 0.553129 Low Low
cufflinks 0.448417 0.0 1.35691 Low  
cufflinks 0.376659 0.0 1.18167 Low  

0 Strain