Gene : Eucgr.E00782 E. grandis v2.0
Defline:  (1 of 1) PTHR10782:SF4 - SUPPRESSOR OF VARIEGATION 2-10, ISOFORM I Genomic Order:  660
Name:  ? Eucgr.E00782 Secondary Identifier:  ? PAC:32029369
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00782 0.5kb upstream 0.5kb upstream 9028 true Chr05: 8128952-8137979 Eucalyptus grandis
Eucgr.E00782 0.5kb upstream 0.5kb upstream 500 false Chr05: 8137480-8137979 Eucalyptus grandis
Eucgr.E00782 0.5kb downstream 0.5kb downstream 9028 true Chr05: 8128452-8137479 Eucalyptus grandis
Eucgr.E00782 0.5kb downstream 0.5kb downstream 500 false Chr05: 8128452-8128951 Eucalyptus grandis
Eucgr.E00782 1.0kb upstream 1.0kb upstream 9528 true Chr05: 8128952-8138479 Eucalyptus grandis
Eucgr.E00782 1.0kb upstream 1.0kb upstream 1000 false Chr05: 8137480-8138479 Eucalyptus grandis
Eucgr.E00782 1.0kb downstream 1.0kb downstream 9528 true Chr05: 8127952-8137479 Eucalyptus grandis
Eucgr.E00782 1.0kb downstream 1.0kb downstream 1000 false Chr05: 8127952-8128951 Eucalyptus grandis
Eucgr.E00782 2.0kb upstream 2.0kb upstream 10528 true Chr05: 8128952-8139479 Eucalyptus grandis
Eucgr.E00782 2.0kb upstream 2.0kb upstream 2000 false Chr05: 8137480-8139479 Eucalyptus grandis
Eucgr.E00782 2.0kb downstream 2.0kb downstream 10528 true Chr05: 8126952-8137479 Eucalyptus grandis
Eucgr.E00782 2.0kb downstream 2.0kb downstream 2000 false Chr05: 8126952-8128951 Eucalyptus grandis
Eucgr.E00782 5.0kb upstream 5.0kb upstream 13528 true Chr05: 8128952-8142479 Eucalyptus grandis
Eucgr.E00782 5.0kb upstream 5.0kb upstream 5000 false Chr05: 8137480-8142479 Eucalyptus grandis
Eucgr.E00782 5.0kb downstream 5.0kb downstream 13528 true Chr05: 8123952-8137479 Eucalyptus grandis
Eucgr.E00782 5.0kb downstream 5.0kb downstream 5000 false Chr05: 8123952-8128951 Eucalyptus grandis
Eucgr.E00782 10.0kb upstream 10.0kb upstream 18528 true Chr05: 8128952-8147479 Eucalyptus grandis
Eucgr.E00782 10.0kb upstream 10.0kb upstream 10000 false Chr05: 8137480-8147479 Eucalyptus grandis
Eucgr.E00782 10.0kb downstream 10.0kb downstream 18528 true Chr05: 8118952-8137479 Eucalyptus grandis
Eucgr.E00782 10.0kb downstream 10.0kb downstream 10000 false Chr05: 8118952-8128951 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062957 5270 Rosid View MSA
123737680 5271 Pentapetalae View MSA
122797749 5272 Eudicot View MSA
122050924 5273 Angiosperm View MSA
121346660 5274 Embryophyte View MSA
123426833 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.57472 0.0 21.4358    
cufflinks 12.7816 0.0 28.3441    
cufflinks 13.5122 0.0 29.9527   High
cufflinks 8.52197 0.0 19.1546   Low
cufflinks 8.75236 0.0 19.6386    
cufflinks 12.6791 0.0 28.1575    

0 Strain