Gene : Eucgr.E00762 E. grandis v2.0
Defline:  (1 of 17) PF10382 - Protein of unknown function (DUF2439) (DUF2439) Genomic Order:  646
Name:  ? Eucgr.E00762 Secondary Identifier:  ? PAC:32029926
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00762 0.5kb upstream 0.5kb upstream 2518 true Chr05: 7799108-7801625 Eucalyptus grandis
Eucgr.E00762 0.5kb upstream 0.5kb upstream 500 false Chr05: 7801126-7801625 Eucalyptus grandis
Eucgr.E00762 0.5kb downstream 0.5kb downstream 2518 true Chr05: 7798608-7801125 Eucalyptus grandis
Eucgr.E00762 0.5kb downstream 0.5kb downstream 500 false Chr05: 7798608-7799107 Eucalyptus grandis
Eucgr.E00762 1.0kb upstream 1.0kb upstream 3018 true Chr05: 7799108-7802125 Eucalyptus grandis
Eucgr.E00762 1.0kb upstream 1.0kb upstream 1000 false Chr05: 7801126-7802125 Eucalyptus grandis
Eucgr.E00762 1.0kb downstream 1.0kb downstream 3018 true Chr05: 7798108-7801125 Eucalyptus grandis
Eucgr.E00762 1.0kb downstream 1.0kb downstream 1000 false Chr05: 7798108-7799107 Eucalyptus grandis
Eucgr.E00762 2.0kb upstream 2.0kb upstream 4018 true Chr05: 7799108-7803125 Eucalyptus grandis
Eucgr.E00762 2.0kb upstream 2.0kb upstream 2000 false Chr05: 7801126-7803125 Eucalyptus grandis
Eucgr.E00762 2.0kb downstream 2.0kb downstream 4018 true Chr05: 7797108-7801125 Eucalyptus grandis
Eucgr.E00762 2.0kb downstream 2.0kb downstream 2000 false Chr05: 7797108-7799107 Eucalyptus grandis
Eucgr.E00762 5.0kb upstream 5.0kb upstream 7018 true Chr05: 7799108-7806125 Eucalyptus grandis
Eucgr.E00762 5.0kb upstream 5.0kb upstream 5000 false Chr05: 7801126-7806125 Eucalyptus grandis
Eucgr.E00762 5.0kb downstream 5.0kb downstream 7018 true Chr05: 7794108-7801125 Eucalyptus grandis
Eucgr.E00762 5.0kb downstream 5.0kb downstream 5000 false Chr05: 7794108-7799107 Eucalyptus grandis
Eucgr.E00762 10.0kb upstream 10.0kb upstream 12018 true Chr05: 7799108-7811125 Eucalyptus grandis
Eucgr.E00762 10.0kb upstream 10.0kb upstream 10000 false Chr05: 7801126-7811125 Eucalyptus grandis
Eucgr.E00762 10.0kb downstream 10.0kb downstream 12018 true Chr05: 7789108-7801125 Eucalyptus grandis
Eucgr.E00762 10.0kb downstream 10.0kb downstream 10000 false Chr05: 7789108-7799107 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027215 5273 Angiosperm View MSA
124051275 5270 Rosid View MSA
123750964 5271 Pentapetalae View MSA
122795180 5272 Eudicot View MSA
121296903 5274 Embryophyte View MSA
123335011 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.556725 0.0 1.93847   Low
cufflinks 6.3786 0.0 16.5816   High
cufflinks 0.993395 0.0 3.19012    
cufflinks 3.30713 0.0 9.22896    
cufflinks 4.23796 0.0 11.5918    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain