Gene : Eucgr.E00555 E. grandis v2.0
Defline:  (1 of 1) PTHR10015:SF169 - HEAT STRESS TRANSCRIPTION FACTOR B-2B Genomic Order:  499
Name:  ? Eucgr.E00555 Secondary Identifier:  ? PAC:32029473
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00555 0.5kb upstream 0.5kb upstream 2335 true Chr05: 5337943-5340277 Eucalyptus grandis
Eucgr.E00555 0.5kb upstream 0.5kb upstream 500 false Chr05: 5339778-5340277 Eucalyptus grandis
Eucgr.E00555 0.5kb downstream 0.5kb downstream 2335 true Chr05: 5337443-5339777 Eucalyptus grandis
Eucgr.E00555 0.5kb downstream 0.5kb downstream 500 false Chr05: 5337443-5337942 Eucalyptus grandis
Eucgr.E00555 1.0kb upstream 1.0kb upstream 2835 true Chr05: 5337943-5340777 Eucalyptus grandis
Eucgr.E00555 1.0kb upstream 1.0kb upstream 1000 false Chr05: 5339778-5340777 Eucalyptus grandis
Eucgr.E00555 1.0kb downstream 1.0kb downstream 2835 true Chr05: 5336943-5339777 Eucalyptus grandis
Eucgr.E00555 1.0kb downstream 1.0kb downstream 1000 false Chr05: 5336943-5337942 Eucalyptus grandis
Eucgr.E00555 2.0kb upstream 2.0kb upstream 3835 true Chr05: 5337943-5341777 Eucalyptus grandis
Eucgr.E00555 2.0kb upstream 2.0kb upstream 2000 false Chr05: 5339778-5341777 Eucalyptus grandis
Eucgr.E00555 2.0kb downstream 2.0kb downstream 3835 true Chr05: 5335943-5339777 Eucalyptus grandis
Eucgr.E00555 2.0kb downstream 2.0kb downstream 2000 false Chr05: 5335943-5337942 Eucalyptus grandis
Eucgr.E00555 5.0kb upstream 5.0kb upstream 6835 true Chr05: 5337943-5344777 Eucalyptus grandis
Eucgr.E00555 5.0kb upstream 5.0kb upstream 5000 false Chr05: 5339778-5344777 Eucalyptus grandis
Eucgr.E00555 5.0kb downstream 5.0kb downstream 6835 true Chr05: 5332943-5339777 Eucalyptus grandis
Eucgr.E00555 5.0kb downstream 5.0kb downstream 5000 false Chr05: 5332943-5337942 Eucalyptus grandis
Eucgr.E00555 10.0kb upstream 10.0kb upstream 11835 true Chr05: 5337943-5349777 Eucalyptus grandis
Eucgr.E00555 10.0kb upstream 10.0kb upstream 10000 false Chr05: 5339778-5349777 Eucalyptus grandis
Eucgr.E00555 10.0kb downstream 10.0kb downstream 11835 true Chr05: 5327943-5339777 Eucalyptus grandis
Eucgr.E00555 10.0kb downstream 10.0kb downstream 10000 false Chr05: 5327943-5337942 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066248 5270 Rosid View MSA
123750823 5271 Pentapetalae View MSA
122797389 5272 Eudicot View MSA
122047819 5273 Angiosperm View MSA
121349623 5274 Embryophyte View MSA
123428852 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.2174 0.0 55.9752    
cufflinks 63.3609 0.0 140.895 High High
cufflinks 31.1849 0.0 69.1312 High  
cufflinks 41.8206 0.0 92.4849 High  
cufflinks 40.9124 0.0 90.4771 High  
cufflinks 14.402 0.0 32.476   Low

0 Strain