Gene : Eucgr.E00562 E. grandis v2.0
Defline:  (1 of 22) PTHR10774 - EXTENDED SYNAPTOTAGMIN-RELATED Genomic Order:  504
Name:  ? Eucgr.E00562 Secondary Identifier:  ? PAC:32030150
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00562 0.5kb upstream 0.5kb upstream 3143 true Chr05: 5368237-5371379 Eucalyptus grandis
Eucgr.E00562 0.5kb upstream 0.5kb upstream 500 false Chr05: 5368237-5368736 Eucalyptus grandis
Eucgr.E00562 0.5kb downstream 0.5kb downstream 3143 true Chr05: 5368737-5371879 Eucalyptus grandis
Eucgr.E00562 0.5kb downstream 0.5kb downstream 500 false Chr05: 5371380-5371879 Eucalyptus grandis
Eucgr.E00562 1.0kb upstream 1.0kb upstream 3643 true Chr05: 5367737-5371379 Eucalyptus grandis
Eucgr.E00562 1.0kb upstream 1.0kb upstream 1000 false Chr05: 5367737-5368736 Eucalyptus grandis
Eucgr.E00562 1.0kb downstream 1.0kb downstream 3643 true Chr05: 5368737-5372379 Eucalyptus grandis
Eucgr.E00562 1.0kb downstream 1.0kb downstream 1000 false Chr05: 5371380-5372379 Eucalyptus grandis
Eucgr.E00562 2.0kb upstream 2.0kb upstream 4643 true Chr05: 5366737-5371379 Eucalyptus grandis
Eucgr.E00562 2.0kb upstream 2.0kb upstream 2000 false Chr05: 5366737-5368736 Eucalyptus grandis
Eucgr.E00562 2.0kb downstream 2.0kb downstream 4643 true Chr05: 5368737-5373379 Eucalyptus grandis
Eucgr.E00562 2.0kb downstream 2.0kb downstream 2000 false Chr05: 5371380-5373379 Eucalyptus grandis
Eucgr.E00562 5.0kb upstream 5.0kb upstream 7643 true Chr05: 5363737-5371379 Eucalyptus grandis
Eucgr.E00562 5.0kb upstream 5.0kb upstream 5000 false Chr05: 5363737-5368736 Eucalyptus grandis
Eucgr.E00562 5.0kb downstream 5.0kb downstream 7643 true Chr05: 5368737-5376379 Eucalyptus grandis
Eucgr.E00562 5.0kb downstream 5.0kb downstream 5000 false Chr05: 5371380-5376379 Eucalyptus grandis
Eucgr.E00562 10.0kb upstream 10.0kb upstream 12643 true Chr05: 5358737-5371379 Eucalyptus grandis
Eucgr.E00562 10.0kb upstream 10.0kb upstream 10000 false Chr05: 5358737-5368736 Eucalyptus grandis
Eucgr.E00562 10.0kb downstream 10.0kb downstream 12643 true Chr05: 5368737-5381379 Eucalyptus grandis
Eucgr.E00562 10.0kb downstream 10.0kb downstream 10000 false Chr05: 5371380-5381379 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062814 5270 Rosid View MSA
123751939 5271 Pentapetalae View MSA
122788067 5272 Eudicot View MSA
122043310 5273 Angiosperm View MSA
121351694 5274 Embryophyte View MSA
123426112 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.85749 0.0 24.5685    
cufflinks 41.7758 0.0 93.158    
cufflinks 9.35951 0.0 23.484    
cufflinks 123.368 0.0 275.273 High High
cufflinks 45.3454 0.0 100.945 High  
cufflinks 3.64606 0.0 10.0182   Low

0 Strain