Gene : Eucgr.E00444 E. grandis v2.0
Defline:  (1 of 2) 1.1.1.27 - L-lactate dehydrogenase / L-lactic dehydrogenase Genomic Order:  399
Name:  ? Eucgr.E00444 Secondary Identifier:  ? PAC:32028371
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis ANAEROFRUCAT-PWY Eucalyptus grandis pathologic  
Egrandis PWY-5481 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00444 0.5kb upstream 0.5kb upstream 3082 true Chr05: 4259693-4262774 Eucalyptus grandis
Eucgr.E00444 0.5kb upstream 0.5kb upstream 500 false Chr05: 4259693-4260192 Eucalyptus grandis
Eucgr.E00444 0.5kb downstream 0.5kb downstream 3082 true Chr05: 4260193-4263274 Eucalyptus grandis
Eucgr.E00444 0.5kb downstream 0.5kb downstream 500 false Chr05: 4262775-4263274 Eucalyptus grandis
Eucgr.E00444 1.0kb upstream 1.0kb upstream 3582 true Chr05: 4259193-4262774 Eucalyptus grandis
Eucgr.E00444 1.0kb upstream 1.0kb upstream 1000 false Chr05: 4259193-4260192 Eucalyptus grandis
Eucgr.E00444 1.0kb downstream 1.0kb downstream 3582 true Chr05: 4260193-4263774 Eucalyptus grandis
Eucgr.E00444 1.0kb downstream 1.0kb downstream 1000 false Chr05: 4262775-4263774 Eucalyptus grandis
Eucgr.E00444 2.0kb upstream 2.0kb upstream 4582 true Chr05: 4258193-4262774 Eucalyptus grandis
Eucgr.E00444 2.0kb upstream 2.0kb upstream 2000 false Chr05: 4258193-4260192 Eucalyptus grandis
Eucgr.E00444 2.0kb downstream 2.0kb downstream 4582 true Chr05: 4260193-4264774 Eucalyptus grandis
Eucgr.E00444 2.0kb downstream 2.0kb downstream 2000 false Chr05: 4262775-4264774 Eucalyptus grandis
Eucgr.E00444 5.0kb upstream 5.0kb upstream 7582 true Chr05: 4255193-4262774 Eucalyptus grandis
Eucgr.E00444 5.0kb upstream 5.0kb upstream 5000 false Chr05: 4255193-4260192 Eucalyptus grandis
Eucgr.E00444 5.0kb downstream 5.0kb downstream 7582 true Chr05: 4260193-4267774 Eucalyptus grandis
Eucgr.E00444 5.0kb downstream 5.0kb downstream 5000 false Chr05: 4262775-4267774 Eucalyptus grandis
Eucgr.E00444 10.0kb upstream 10.0kb upstream 12582 true Chr05: 4250193-4262774 Eucalyptus grandis
Eucgr.E00444 10.0kb upstream 10.0kb upstream 10000 false Chr05: 4250193-4260192 Eucalyptus grandis
Eucgr.E00444 10.0kb downstream 10.0kb downstream 12582 true Chr05: 4260193-4272774 Eucalyptus grandis
Eucgr.E00444 10.0kb downstream 10.0kb downstream 10000 false Chr05: 4262775-4272774 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064441 5270 Rosid View MSA
123739146 5271 Pentapetalae View MSA
122785845 5272 Eudicot View MSA
122045770 5273 Angiosperm View MSA
121350532 5274 Embryophyte View MSA
123381776 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.1327 0.0 34.1563    
cufflinks 26.704 0.0 59.205    
cufflinks 25.4129 0.0 56.4327    
cufflinks 26.1134 0.0 57.9502    
cufflinks 34.0082 0.0 75.2133    
cufflinks 4.39563 0.0 10.9249   Low

0 Strain