Gene : Eucgr.E00409 E. grandis v2.0
Defline:  (1 of 1) PTHR11361:SF21 - MUTS PROTEIN HOMOLOG 4 Genomic Order:  371
Name:  ? Eucgr.E00409 Secondary Identifier:  ? PAC:32030019
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00409 0.5kb upstream 0.5kb upstream 11216 true Chr05: 3885784-3896999 Eucalyptus grandis
Eucgr.E00409 0.5kb upstream 0.5kb upstream 500 false Chr05: 3896500-3896999 Eucalyptus grandis
Eucgr.E00409 0.5kb downstream 0.5kb downstream 11216 true Chr05: 3885284-3896499 Eucalyptus grandis
Eucgr.E00409 0.5kb downstream 0.5kb downstream 500 false Chr05: 3885284-3885783 Eucalyptus grandis
Eucgr.E00409 1.0kb upstream 1.0kb upstream 11716 true Chr05: 3885784-3897499 Eucalyptus grandis
Eucgr.E00409 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3896500-3897499 Eucalyptus grandis
Eucgr.E00409 1.0kb downstream 1.0kb downstream 11716 true Chr05: 3884784-3896499 Eucalyptus grandis
Eucgr.E00409 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3884784-3885783 Eucalyptus grandis
Eucgr.E00409 2.0kb upstream 2.0kb upstream 12716 true Chr05: 3885784-3898499 Eucalyptus grandis
Eucgr.E00409 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3896500-3898499 Eucalyptus grandis
Eucgr.E00409 2.0kb downstream 2.0kb downstream 12716 true Chr05: 3883784-3896499 Eucalyptus grandis
Eucgr.E00409 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3883784-3885783 Eucalyptus grandis
Eucgr.E00409 5.0kb upstream 5.0kb upstream 15716 true Chr05: 3885784-3901499 Eucalyptus grandis
Eucgr.E00409 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3896500-3901499 Eucalyptus grandis
Eucgr.E00409 5.0kb downstream 5.0kb downstream 15716 true Chr05: 3880784-3896499 Eucalyptus grandis
Eucgr.E00409 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3880784-3885783 Eucalyptus grandis
Eucgr.E00409 10.0kb upstream 10.0kb upstream 20716 true Chr05: 3885784-3906499 Eucalyptus grandis
Eucgr.E00409 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3896500-3906499 Eucalyptus grandis
Eucgr.E00409 10.0kb downstream 10.0kb downstream 20716 true Chr05: 3875784-3896499 Eucalyptus grandis
Eucgr.E00409 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3875784-3885783 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050311 5270 Rosid View MSA
123737053 5271 Pentapetalae View MSA
122788713 5272 Eudicot View MSA
122042795 5273 Angiosperm View MSA
121346371 5274 Embryophyte View MSA
123424062 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.095875 0.0 0.358502 Low  
cufflinks 0.792886 0.0 2.24556 Low  
cufflinks 0.0902275 0.0 0.338221 Low  
cufflinks 2.05459 0.0 5.29828   High
cufflinks 0.191241 0.0 0.647421 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain