Gene : Eucgr.E01219 E. grandis v2.0
Defline:  (1 of 10) PF03101//PF10551 - FAR1 DNA-binding domain (FAR1) // MULE transposase domain (MULE) Genomic Order:  959
Name:  ? Eucgr.E01219 Secondary Identifier:  ? PAC:32031537
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E01219 0.5kb upstream 0.5kb upstream 2342 true Chr05: 12032097-12034438 Eucalyptus grandis
Eucgr.E01219 0.5kb upstream 0.5kb upstream 500 false Chr05: 12032097-12032596 Eucalyptus grandis
Eucgr.E01219 0.5kb downstream 0.5kb downstream 2342 true Chr05: 12032597-12034938 Eucalyptus grandis
Eucgr.E01219 0.5kb downstream 0.5kb downstream 500 false Chr05: 12034439-12034938 Eucalyptus grandis
Eucgr.E01219 1.0kb upstream 1.0kb upstream 2842 true Chr05: 12031597-12034438 Eucalyptus grandis
Eucgr.E01219 1.0kb upstream 1.0kb upstream 1000 false Chr05: 12031597-12032596 Eucalyptus grandis
Eucgr.E01219 1.0kb downstream 1.0kb downstream 2842 true Chr05: 12032597-12035438 Eucalyptus grandis
Eucgr.E01219 1.0kb downstream 1.0kb downstream 1000 false Chr05: 12034439-12035438 Eucalyptus grandis
Eucgr.E01219 2.0kb upstream 2.0kb upstream 3842 true Chr05: 12030597-12034438 Eucalyptus grandis
Eucgr.E01219 2.0kb upstream 2.0kb upstream 2000 false Chr05: 12030597-12032596 Eucalyptus grandis
Eucgr.E01219 2.0kb downstream 2.0kb downstream 3842 true Chr05: 12032597-12036438 Eucalyptus grandis
Eucgr.E01219 2.0kb downstream 2.0kb downstream 2000 false Chr05: 12034439-12036438 Eucalyptus grandis
Eucgr.E01219 5.0kb upstream 5.0kb upstream 6842 true Chr05: 12027597-12034438 Eucalyptus grandis
Eucgr.E01219 5.0kb upstream 5.0kb upstream 5000 false Chr05: 12027597-12032596 Eucalyptus grandis
Eucgr.E01219 5.0kb downstream 5.0kb downstream 6842 true Chr05: 12032597-12039438 Eucalyptus grandis
Eucgr.E01219 5.0kb downstream 5.0kb downstream 5000 false Chr05: 12034439-12039438 Eucalyptus grandis
Eucgr.E01219 10.0kb upstream 10.0kb upstream 11842 true Chr05: 12022597-12034438 Eucalyptus grandis
Eucgr.E01219 10.0kb upstream 10.0kb upstream 10000 false Chr05: 12022597-12032596 Eucalyptus grandis
Eucgr.E01219 10.0kb downstream 10.0kb downstream 11842 true Chr05: 12032597-12044438 Eucalyptus grandis
Eucgr.E01219 10.0kb downstream 10.0kb downstream 10000 false Chr05: 12034439-12044438 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124051005 5270 Rosid View MSA
123753434 5271 Pentapetalae View MSA
122797932 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.679315 0.0 2.04211    
cufflinks 4.93042 0.0 11.8897   High
cufflinks 0.673802 0.0 2.00515    
cufflinks 0.952905 0.0 2.70353    
cufflinks 5.79109 0.0 13.8721   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain