Gene : Eucgr.E01171 E. grandis v2.0
Defline:  (1 of 1) PTHR31642:SF24 - HXXXD-TYPE ACYL-TRANSFERASE-LIKE PROTEIN Genomic Order:  923
Name:  ? Eucgr.E01171 Secondary Identifier:  ? PAC:32031927
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-4203 Eucalyptus grandis pathologic  
Egrandis PWY-5835 Eucalyptus grandis pathologic  
Egrandis PWY-6801 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E01171 0.5kb upstream 0.5kb upstream 2704 true Chr05: 11407893-11410596 Eucalyptus grandis
Eucgr.E01171 0.5kb upstream 0.5kb upstream 500 false Chr05: 11407893-11408392 Eucalyptus grandis
Eucgr.E01171 0.5kb downstream 0.5kb downstream 2704 true Chr05: 11408393-11411096 Eucalyptus grandis
Eucgr.E01171 0.5kb downstream 0.5kb downstream 500 false Chr05: 11410597-11411096 Eucalyptus grandis
Eucgr.E01171 1.0kb upstream 1.0kb upstream 3204 true Chr05: 11407393-11410596 Eucalyptus grandis
Eucgr.E01171 1.0kb upstream 1.0kb upstream 1000 false Chr05: 11407393-11408392 Eucalyptus grandis
Eucgr.E01171 1.0kb downstream 1.0kb downstream 3204 true Chr05: 11408393-11411596 Eucalyptus grandis
Eucgr.E01171 1.0kb downstream 1.0kb downstream 1000 false Chr05: 11410597-11411596 Eucalyptus grandis
Eucgr.E01171 2.0kb upstream 2.0kb upstream 4204 true Chr05: 11406393-11410596 Eucalyptus grandis
Eucgr.E01171 2.0kb upstream 2.0kb upstream 2000 false Chr05: 11406393-11408392 Eucalyptus grandis
Eucgr.E01171 2.0kb downstream 2.0kb downstream 4204 true Chr05: 11408393-11412596 Eucalyptus grandis
Eucgr.E01171 2.0kb downstream 2.0kb downstream 2000 false Chr05: 11410597-11412596 Eucalyptus grandis
Eucgr.E01171 5.0kb upstream 5.0kb upstream 7204 true Chr05: 11403393-11410596 Eucalyptus grandis
Eucgr.E01171 5.0kb upstream 5.0kb upstream 5000 false Chr05: 11403393-11408392 Eucalyptus grandis
Eucgr.E01171 5.0kb downstream 5.0kb downstream 7204 true Chr05: 11408393-11415596 Eucalyptus grandis
Eucgr.E01171 5.0kb downstream 5.0kb downstream 5000 false Chr05: 11410597-11415596 Eucalyptus grandis
Eucgr.E01171 10.0kb upstream 10.0kb upstream 12204 true Chr05: 11398393-11410596 Eucalyptus grandis
Eucgr.E01171 10.0kb upstream 10.0kb upstream 10000 false Chr05: 11398393-11408392 Eucalyptus grandis
Eucgr.E01171 10.0kb downstream 10.0kb downstream 12204 true Chr05: 11408393-11420596 Eucalyptus grandis
Eucgr.E01171 10.0kb downstream 10.0kb downstream 10000 false Chr05: 11410597-11420596 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061522 5270 Rosid View MSA
123756556 5271 Pentapetalae View MSA
122797720 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 8.16737 0.0 19.3584   High
cufflinks 0.222189 0.0 0.78902 Low  
cufflinks 0.143755 0.0 0.541632 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain