Gene : Eucgr.E00871 E. grandis v2.0
Defline:  (1 of 1) PTHR11349:SF53 - NUCLEOSIDE DIPHOSPHATE KINASE-RELATED Genomic Order:  740
Name:  ? Eucgr.E00871 Secondary Identifier:  ? PAC:32028531
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Sequence Feature Displayer

Ontology Annotation Displayer

21 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY0-162 Eucalyptus grandis pathologic  
Egrandis PWY-6126 Eucalyptus grandis pathologic  
Egrandis PWY-6545 Eucalyptus grandis pathologic  
Egrandis PWY-7176 Eucalyptus grandis pathologic  
Egrandis PWY-7184 Eucalyptus grandis pathologic  
Egrandis PWY-7196 Eucalyptus grandis pathologic  
Egrandis PWY-7197 Eucalyptus grandis pathologic  
Egrandis PWY-7200 Eucalyptus grandis pathologic  
Egrandis PWY-7205 Eucalyptus grandis pathologic  
Egrandis PWY-7208 Eucalyptus grandis pathologic  
Egrandis PWY-7210 Eucalyptus grandis pathologic  
Egrandis PWY-7211 Eucalyptus grandis pathologic  
Egrandis PWY-7220 Eucalyptus grandis pathologic  
Egrandis PWY-7221 Eucalyptus grandis pathologic  
Egrandis PWY-7222 Eucalyptus grandis pathologic  
Egrandis PWY-7224 Eucalyptus grandis pathologic  
Egrandis PWY-7226 Eucalyptus grandis pathologic  
Egrandis PWY-7227 Eucalyptus grandis pathologic  
Egrandis PWY-7228 Eucalyptus grandis pathologic  
Egrandis PWY-7229 Eucalyptus grandis pathologic  
Egrandis PWY-841 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00871 0.5kb upstream 0.5kb upstream 3748 true Chr05: 9171091-9174838 Eucalyptus grandis
Eucgr.E00871 0.5kb upstream 0.5kb upstream 500 false Chr05: 9171091-9171590 Eucalyptus grandis
Eucgr.E00871 0.5kb downstream 0.5kb downstream 3748 true Chr05: 9171591-9175338 Eucalyptus grandis
Eucgr.E00871 0.5kb downstream 0.5kb downstream 500 false Chr05: 9174839-9175338 Eucalyptus grandis
Eucgr.E00871 1.0kb upstream 1.0kb upstream 4248 true Chr05: 9170591-9174838 Eucalyptus grandis
Eucgr.E00871 1.0kb upstream 1.0kb upstream 1000 false Chr05: 9170591-9171590 Eucalyptus grandis
Eucgr.E00871 1.0kb downstream 1.0kb downstream 4248 true Chr05: 9171591-9175838 Eucalyptus grandis
Eucgr.E00871 1.0kb downstream 1.0kb downstream 1000 false Chr05: 9174839-9175838 Eucalyptus grandis
Eucgr.E00871 2.0kb upstream 2.0kb upstream 5248 true Chr05: 9169591-9174838 Eucalyptus grandis
Eucgr.E00871 2.0kb upstream 2.0kb upstream 2000 false Chr05: 9169591-9171590 Eucalyptus grandis
Eucgr.E00871 2.0kb downstream 2.0kb downstream 5248 true Chr05: 9171591-9176838 Eucalyptus grandis
Eucgr.E00871 2.0kb downstream 2.0kb downstream 2000 false Chr05: 9174839-9176838 Eucalyptus grandis
Eucgr.E00871 5.0kb upstream 5.0kb upstream 8248 true Chr05: 9166591-9174838 Eucalyptus grandis
Eucgr.E00871 5.0kb upstream 5.0kb upstream 5000 false Chr05: 9166591-9171590 Eucalyptus grandis
Eucgr.E00871 5.0kb downstream 5.0kb downstream 8248 true Chr05: 9171591-9179838 Eucalyptus grandis
Eucgr.E00871 5.0kb downstream 5.0kb downstream 5000 false Chr05: 9174839-9179838 Eucalyptus grandis
Eucgr.E00871 10.0kb upstream 10.0kb upstream 13248 true Chr05: 9161591-9174838 Eucalyptus grandis
Eucgr.E00871 10.0kb upstream 10.0kb upstream 10000 false Chr05: 9161591-9171590 Eucalyptus grandis
Eucgr.E00871 10.0kb downstream 10.0kb downstream 13248 true Chr05: 9171591-9184838 Eucalyptus grandis
Eucgr.E00871 10.0kb downstream 10.0kb downstream 10000 false Chr05: 9174839-9184838 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068099 5270 Rosid View MSA
123749251 5271 Pentapetalae View MSA
122792257 5272 Eudicot View MSA
122050213 5273 Angiosperm View MSA
123428962 5275 Viridiplantae View MSA
121346571 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 132.564 0.0 357.656 High High
cufflinks 5.74851 0.0 14.873   Low
cufflinks 70.7978 0.0 189.276 High  
cufflinks 5.44709 0.0 13.9048   Low
cufflinks 26.5885 0.0 60.312    
cufflinks 68.331 0.0 157.628 High  

0 Strain