Gene : Eucgr.E00884 E. grandis v2.0
Defline:  (1 of 1) PF02229//PF08766 - Transcriptional Coactivator p15 (PC4) (PC4) // DEK C terminal domain (DEK_C) Genomic Order:  753
Name:  ? Eucgr.E00884 Secondary Identifier:  ? PAC:32030931
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00884 0.5kb upstream 0.5kb upstream 3707 true Chr05: 9268831-9272537 Eucalyptus grandis
Eucgr.E00884 0.5kb upstream 0.5kb upstream 500 false Chr05: 9268831-9269330 Eucalyptus grandis
Eucgr.E00884 0.5kb downstream 0.5kb downstream 3707 true Chr05: 9269331-9273037 Eucalyptus grandis
Eucgr.E00884 0.5kb downstream 0.5kb downstream 500 false Chr05: 9272538-9273037 Eucalyptus grandis
Eucgr.E00884 1.0kb upstream 1.0kb upstream 4207 true Chr05: 9268331-9272537 Eucalyptus grandis
Eucgr.E00884 1.0kb upstream 1.0kb upstream 1000 false Chr05: 9268331-9269330 Eucalyptus grandis
Eucgr.E00884 1.0kb downstream 1.0kb downstream 4207 true Chr05: 9269331-9273537 Eucalyptus grandis
Eucgr.E00884 1.0kb downstream 1.0kb downstream 1000 false Chr05: 9272538-9273537 Eucalyptus grandis
Eucgr.E00884 2.0kb upstream 2.0kb upstream 5207 true Chr05: 9267331-9272537 Eucalyptus grandis
Eucgr.E00884 2.0kb upstream 2.0kb upstream 2000 false Chr05: 9267331-9269330 Eucalyptus grandis
Eucgr.E00884 2.0kb downstream 2.0kb downstream 5207 true Chr05: 9269331-9274537 Eucalyptus grandis
Eucgr.E00884 2.0kb downstream 2.0kb downstream 2000 false Chr05: 9272538-9274537 Eucalyptus grandis
Eucgr.E00884 5.0kb upstream 5.0kb upstream 8207 true Chr05: 9264331-9272537 Eucalyptus grandis
Eucgr.E00884 5.0kb upstream 5.0kb upstream 5000 false Chr05: 9264331-9269330 Eucalyptus grandis
Eucgr.E00884 5.0kb downstream 5.0kb downstream 8207 true Chr05: 9269331-9277537 Eucalyptus grandis
Eucgr.E00884 5.0kb downstream 5.0kb downstream 5000 false Chr05: 9272538-9277537 Eucalyptus grandis
Eucgr.E00884 10.0kb upstream 10.0kb upstream 13207 true Chr05: 9259331-9272537 Eucalyptus grandis
Eucgr.E00884 10.0kb upstream 10.0kb upstream 10000 false Chr05: 9259331-9269330 Eucalyptus grandis
Eucgr.E00884 10.0kb downstream 10.0kb downstream 13207 true Chr05: 9269331-9282537 Eucalyptus grandis
Eucgr.E00884 10.0kb downstream 10.0kb downstream 10000 false Chr05: 9272538-9282537 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066656 5270 Rosid View MSA
123749288 5271 Pentapetalae View MSA
122790546 5272 Eudicot View MSA
122043186 5273 Angiosperm View MSA
121348005 5274 Embryophyte View MSA
123427584 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.0154 0.0 42.9878    
cufflinks 11.0449 0.0 26.0513   Low
cufflinks 20.3647 0.0 45.8575    
cufflinks 13.0726 0.0 30.2303    
cufflinks 32.6723 0.0 72.4312   High
cufflinks 22.763 0.0 50.9074    

0 Strain