Gene : Eucgr.E01785 E. grandis v2.0
Defline:  (1 of 1) KOG2153 - Protein involved in the nuclear export of pre-ribosomes Genomic Order:  1395
Name:  ? Eucgr.E01785 Secondary Identifier:  ? PAC:32030650
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E01785 0.5kb upstream 0.5kb upstream 6923 true Chr05: 22162782-22169704 Eucalyptus grandis
Eucgr.E01785 0.5kb upstream 0.5kb upstream 500 false Chr05: 22162782-22163281 Eucalyptus grandis
Eucgr.E01785 0.5kb downstream 0.5kb downstream 6923 true Chr05: 22163282-22170204 Eucalyptus grandis
Eucgr.E01785 0.5kb downstream 0.5kb downstream 500 false Chr05: 22169705-22170204 Eucalyptus grandis
Eucgr.E01785 1.0kb upstream 1.0kb upstream 7423 true Chr05: 22162282-22169704 Eucalyptus grandis
Eucgr.E01785 1.0kb upstream 1.0kb upstream 1000 false Chr05: 22162282-22163281 Eucalyptus grandis
Eucgr.E01785 1.0kb downstream 1.0kb downstream 7423 true Chr05: 22163282-22170704 Eucalyptus grandis
Eucgr.E01785 1.0kb downstream 1.0kb downstream 1000 false Chr05: 22169705-22170704 Eucalyptus grandis
Eucgr.E01785 2.0kb upstream 2.0kb upstream 8423 true Chr05: 22161282-22169704 Eucalyptus grandis
Eucgr.E01785 2.0kb upstream 2.0kb upstream 2000 false Chr05: 22161282-22163281 Eucalyptus grandis
Eucgr.E01785 2.0kb downstream 2.0kb downstream 8423 true Chr05: 22163282-22171704 Eucalyptus grandis
Eucgr.E01785 2.0kb downstream 2.0kb downstream 2000 false Chr05: 22169705-22171704 Eucalyptus grandis
Eucgr.E01785 5.0kb upstream 5.0kb upstream 11423 true Chr05: 22158282-22169704 Eucalyptus grandis
Eucgr.E01785 5.0kb upstream 5.0kb upstream 5000 false Chr05: 22158282-22163281 Eucalyptus grandis
Eucgr.E01785 5.0kb downstream 5.0kb downstream 11423 true Chr05: 22163282-22174704 Eucalyptus grandis
Eucgr.E01785 5.0kb downstream 5.0kb downstream 5000 false Chr05: 22169705-22174704 Eucalyptus grandis
Eucgr.E01785 10.0kb upstream 10.0kb upstream 16423 true Chr05: 22153282-22169704 Eucalyptus grandis
Eucgr.E01785 10.0kb upstream 10.0kb upstream 10000 false Chr05: 22153282-22163281 Eucalyptus grandis
Eucgr.E01785 10.0kb downstream 10.0kb downstream 16423 true Chr05: 22163282-22179704 Eucalyptus grandis
Eucgr.E01785 10.0kb downstream 10.0kb downstream 10000 false Chr05: 22169705-22179704 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068176 5270 Rosid View MSA
123740562 5271 Pentapetalae View MSA
122786357 5272 Eudicot View MSA
122041726 5273 Angiosperm View MSA
121346572 5274 Embryophyte View MSA
123424637 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.25418 0.0 18.4974   High
cufflinks 2.83046 0.0 6.85554   Low
cufflinks 8.4284 0.0 18.843   High
cufflinks 4.05919 0.0 9.48352    
cufflinks 3.97655 0.0 9.34763    
cufflinks 5.63076 0.0 12.9271    

0 Strain