Gene : Eucgr.E01780 E. grandis v2.0
Defline:  (1 of 5) PTHR31956:SF10 - NON-SPECIFIC PHOSPHOLIPASE C2 Genomic Order:  1392
Name:  ? Eucgr.E01780 Secondary Identifier:  ? PAC:32028663
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E01780 0.5kb upstream 0.5kb upstream 5462 true Chr05: 22111889-22117350 Eucalyptus grandis
Eucgr.E01780 0.5kb upstream 0.5kb upstream 500 false Chr05: 22111889-22112388 Eucalyptus grandis
Eucgr.E01780 0.5kb downstream 0.5kb downstream 5462 true Chr05: 22112389-22117850 Eucalyptus grandis
Eucgr.E01780 0.5kb downstream 0.5kb downstream 500 false Chr05: 22117351-22117850 Eucalyptus grandis
Eucgr.E01780 1.0kb upstream 1.0kb upstream 5962 true Chr05: 22111389-22117350 Eucalyptus grandis
Eucgr.E01780 1.0kb upstream 1.0kb upstream 1000 false Chr05: 22111389-22112388 Eucalyptus grandis
Eucgr.E01780 1.0kb downstream 1.0kb downstream 5962 true Chr05: 22112389-22118350 Eucalyptus grandis
Eucgr.E01780 1.0kb downstream 1.0kb downstream 1000 false Chr05: 22117351-22118350 Eucalyptus grandis
Eucgr.E01780 2.0kb upstream 2.0kb upstream 6962 true Chr05: 22110389-22117350 Eucalyptus grandis
Eucgr.E01780 2.0kb upstream 2.0kb upstream 2000 false Chr05: 22110389-22112388 Eucalyptus grandis
Eucgr.E01780 2.0kb downstream 2.0kb downstream 6962 true Chr05: 22112389-22119350 Eucalyptus grandis
Eucgr.E01780 2.0kb downstream 2.0kb downstream 2000 false Chr05: 22117351-22119350 Eucalyptus grandis
Eucgr.E01780 5.0kb upstream 5.0kb upstream 9962 true Chr05: 22107389-22117350 Eucalyptus grandis
Eucgr.E01780 5.0kb upstream 5.0kb upstream 5000 false Chr05: 22107389-22112388 Eucalyptus grandis
Eucgr.E01780 5.0kb downstream 5.0kb downstream 9962 true Chr05: 22112389-22122350 Eucalyptus grandis
Eucgr.E01780 5.0kb downstream 5.0kb downstream 5000 false Chr05: 22117351-22122350 Eucalyptus grandis
Eucgr.E01780 10.0kb upstream 10.0kb upstream 14962 true Chr05: 22102389-22117350 Eucalyptus grandis
Eucgr.E01780 10.0kb upstream 10.0kb upstream 10000 false Chr05: 22102389-22112388 Eucalyptus grandis
Eucgr.E01780 10.0kb downstream 10.0kb downstream 14962 true Chr05: 22112389-22127350 Eucalyptus grandis
Eucgr.E01780 10.0kb downstream 10.0kb downstream 10000 false Chr05: 22117351-22127350 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124043015 5270 Rosid Singleton cluster - no MSA
123747461 5271 Pentapetalae View MSA
122786129 5272 Eudicot View MSA
122043766 5273 Angiosperm View MSA
121350885 5274 Embryophyte View MSA
123381922 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.4344 0.0 26.1423    
cufflinks 7.19388 0.0 17.2395    
cufflinks 13.213 0.0 30.1108    
cufflinks 4.81961 0.0 12.0837    
cufflinks 1.50045 0.0 4.19131    
cufflinks 0.374906 0.0 1.20572 Low Low

0 Strain