Gene : Eucgr.E01594 E. grandis v2.0
Defline:  (1 of 1) 1.13.11.71 - Carotenoid-9',10'-cleaving dioxygenase / Beta-carotene 9',10'-monooxygenase Genomic Order:  1231
Name:  ? Eucgr.E01594 Secondary Identifier:  ? PAC:32028193
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-7101 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E01594 0.5kb upstream 0.5kb upstream 3927 true Chr05: 18270580-18274506 Eucalyptus grandis
Eucgr.E01594 0.5kb upstream 0.5kb upstream 500 false Chr05: 18274007-18274506 Eucalyptus grandis
Eucgr.E01594 0.5kb downstream 0.5kb downstream 3927 true Chr05: 18270080-18274006 Eucalyptus grandis
Eucgr.E01594 0.5kb downstream 0.5kb downstream 500 false Chr05: 18270080-18270579 Eucalyptus grandis
Eucgr.E01594 1.0kb upstream 1.0kb upstream 4427 true Chr05: 18270580-18275006 Eucalyptus grandis
Eucgr.E01594 1.0kb upstream 1.0kb upstream 1000 false Chr05: 18274007-18275006 Eucalyptus grandis
Eucgr.E01594 1.0kb downstream 1.0kb downstream 4427 true Chr05: 18269580-18274006 Eucalyptus grandis
Eucgr.E01594 1.0kb downstream 1.0kb downstream 1000 false Chr05: 18269580-18270579 Eucalyptus grandis
Eucgr.E01594 2.0kb upstream 2.0kb upstream 5427 true Chr05: 18270580-18276006 Eucalyptus grandis
Eucgr.E01594 2.0kb upstream 2.0kb upstream 2000 false Chr05: 18274007-18276006 Eucalyptus grandis
Eucgr.E01594 2.0kb downstream 2.0kb downstream 5427 true Chr05: 18268580-18274006 Eucalyptus grandis
Eucgr.E01594 2.0kb downstream 2.0kb downstream 2000 false Chr05: 18268580-18270579 Eucalyptus grandis
Eucgr.E01594 5.0kb upstream 5.0kb upstream 8427 true Chr05: 18270580-18279006 Eucalyptus grandis
Eucgr.E01594 5.0kb upstream 5.0kb upstream 5000 false Chr05: 18274007-18279006 Eucalyptus grandis
Eucgr.E01594 5.0kb downstream 5.0kb downstream 8427 true Chr05: 18265580-18274006 Eucalyptus grandis
Eucgr.E01594 5.0kb downstream 5.0kb downstream 5000 false Chr05: 18265580-18270579 Eucalyptus grandis
Eucgr.E01594 10.0kb upstream 10.0kb upstream 13427 true Chr05: 18270580-18284006 Eucalyptus grandis
Eucgr.E01594 10.0kb upstream 10.0kb upstream 10000 false Chr05: 18274007-18284006 Eucalyptus grandis
Eucgr.E01594 10.0kb downstream 10.0kb downstream 13427 true Chr05: 18260580-18274006 Eucalyptus grandis
Eucgr.E01594 10.0kb downstream 10.0kb downstream 10000 false Chr05: 18260580-18270579 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061510 5270 Rosid View MSA
123739443 5271 Pentapetalae View MSA
122788061 5272 Eudicot View MSA
122047914 5273 Angiosperm View MSA
123428919 5275 Viridiplantae View MSA
121344181 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.355356 0.0 1.14405 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain