Gene : Eucgr.E02717 E. grandis v2.0
Defline:  (1 of 94) PTHR12411 - CYSTEINE PROTEASE FAMILY C1-RELATED Genomic Order:  2234
Name:  ? Eucgr.E02717 Secondary Identifier:  ? PAC:32028609
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E02717 0.5kb upstream 0.5kb upstream 1701 true Chr05: 49652296-49653996 Eucalyptus grandis
Eucgr.E02717 0.5kb upstream 0.5kb upstream 500 false Chr05: 49652296-49652795 Eucalyptus grandis
Eucgr.E02717 0.5kb downstream 0.5kb downstream 1701 true Chr05: 49652796-49654496 Eucalyptus grandis
Eucgr.E02717 0.5kb downstream 0.5kb downstream 500 false Chr05: 49653997-49654496 Eucalyptus grandis
Eucgr.E02717 1.0kb upstream 1.0kb upstream 2201 true Chr05: 49651796-49653996 Eucalyptus grandis
Eucgr.E02717 1.0kb upstream 1.0kb upstream 1000 false Chr05: 49651796-49652795 Eucalyptus grandis
Eucgr.E02717 1.0kb downstream 1.0kb downstream 2201 true Chr05: 49652796-49654996 Eucalyptus grandis
Eucgr.E02717 1.0kb downstream 1.0kb downstream 1000 false Chr05: 49653997-49654996 Eucalyptus grandis
Eucgr.E02717 2.0kb upstream 2.0kb upstream 3201 true Chr05: 49650796-49653996 Eucalyptus grandis
Eucgr.E02717 2.0kb upstream 2.0kb upstream 2000 false Chr05: 49650796-49652795 Eucalyptus grandis
Eucgr.E02717 2.0kb downstream 2.0kb downstream 3201 true Chr05: 49652796-49655996 Eucalyptus grandis
Eucgr.E02717 2.0kb downstream 2.0kb downstream 2000 false Chr05: 49653997-49655996 Eucalyptus grandis
Eucgr.E02717 5.0kb upstream 5.0kb upstream 6201 true Chr05: 49647796-49653996 Eucalyptus grandis
Eucgr.E02717 5.0kb upstream 5.0kb upstream 5000 false Chr05: 49647796-49652795 Eucalyptus grandis
Eucgr.E02717 5.0kb downstream 5.0kb downstream 6201 true Chr05: 49652796-49658996 Eucalyptus grandis
Eucgr.E02717 5.0kb downstream 5.0kb downstream 5000 false Chr05: 49653997-49658996 Eucalyptus grandis
Eucgr.E02717 10.0kb upstream 10.0kb upstream 11201 true Chr05: 49642796-49653996 Eucalyptus grandis
Eucgr.E02717 10.0kb upstream 10.0kb upstream 10000 false Chr05: 49642796-49652795 Eucalyptus grandis
Eucgr.E02717 10.0kb downstream 10.0kb downstream 11201 true Chr05: 49652796-49663996 Eucalyptus grandis
Eucgr.E02717 10.0kb downstream 10.0kb downstream 10000 false Chr05: 49653997-49663996 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030352 5273 Angiosperm View MSA
124051561 5270 Rosid View MSA
123753893 5271 Pentapetalae View MSA
122775321 5272 Eudicot View MSA
121351776 5274 Embryophyte View MSA
123382319 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.16215 0.0 3.77975    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.52886 0.0 7.47678    

0 Strain