Gene : Eucgr.E02608 E. grandis v2.0
Defline:  (1 of 2) PF02392 - Ycf4 (Ycf4) Genomic Order:  1963
Name:  ? Eucgr.E02608 Secondary Identifier:  ? PAC:32029391
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E02608 0.5kb upstream 0.5kb upstream 1055 true Chr05: 40468814-40469868 Eucalyptus grandis
Eucgr.E02608 0.5kb upstream 0.5kb upstream 500 false Chr05: 40469369-40469868 Eucalyptus grandis
Eucgr.E02608 0.5kb downstream 0.5kb downstream 1055 true Chr05: 40468314-40469368 Eucalyptus grandis
Eucgr.E02608 0.5kb downstream 0.5kb downstream 500 false Chr05: 40468314-40468813 Eucalyptus grandis
Eucgr.E02608 1.0kb upstream 1.0kb upstream 1555 true Chr05: 40468814-40470368 Eucalyptus grandis
Eucgr.E02608 1.0kb upstream 1.0kb upstream 1000 false Chr05: 40469369-40470368 Eucalyptus grandis
Eucgr.E02608 1.0kb downstream 1.0kb downstream 1555 true Chr05: 40467814-40469368 Eucalyptus grandis
Eucgr.E02608 1.0kb downstream 1.0kb downstream 1000 false Chr05: 40467814-40468813 Eucalyptus grandis
Eucgr.E02608 2.0kb upstream 2.0kb upstream 2555 true Chr05: 40468814-40471368 Eucalyptus grandis
Eucgr.E02608 2.0kb upstream 2.0kb upstream 2000 false Chr05: 40469369-40471368 Eucalyptus grandis
Eucgr.E02608 2.0kb downstream 2.0kb downstream 2555 true Chr05: 40466814-40469368 Eucalyptus grandis
Eucgr.E02608 2.0kb downstream 2.0kb downstream 2000 false Chr05: 40466814-40468813 Eucalyptus grandis
Eucgr.E02608 5.0kb upstream 5.0kb upstream 5555 true Chr05: 40468814-40474368 Eucalyptus grandis
Eucgr.E02608 5.0kb upstream 5.0kb upstream 5000 false Chr05: 40469369-40474368 Eucalyptus grandis
Eucgr.E02608 5.0kb downstream 5.0kb downstream 5555 true Chr05: 40463814-40469368 Eucalyptus grandis
Eucgr.E02608 5.0kb downstream 5.0kb downstream 5000 false Chr05: 40463814-40468813 Eucalyptus grandis
Eucgr.E02608 10.0kb upstream 10.0kb upstream 10555 true Chr05: 40468814-40479368 Eucalyptus grandis
Eucgr.E02608 10.0kb upstream 10.0kb upstream 10000 false Chr05: 40469369-40479368 Eucalyptus grandis
Eucgr.E02608 10.0kb downstream 10.0kb downstream 10555 true Chr05: 40458814-40469368 Eucalyptus grandis
Eucgr.E02608 10.0kb downstream 10.0kb downstream 10000 false Chr05: 40458814-40468813 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065703 5270 Rosid View MSA
123751947 5271 Pentapetalae View MSA
122797651 5272 Eudicot View MSA
122050822 5273 Angiosperm View MSA
121312149 5274 Embryophyte View MSA
123425447 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.68368 0.0 13.9279    
cufflinks 3.53055 0.0 10.7    
cufflinks 4.08091 0.0 12.2807    
cufflinks 7.77106 0.0 21.7294    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 26.9269 0.0 67.6508   High

0 Strain