Gene : Eucgr.E03319 E. grandis v2.0
Defline:  (1 of 3) PTHR11647:SF4 - ALLANTOINASE Genomic Order:  2418
Name:  ? Eucgr.E03319 Secondary Identifier:  ? PAC:32028636
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5692 Eucalyptus grandis pathologic  
Egrandis PWY-5698 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E03319 0.5kb upstream 0.5kb upstream 9014 true Chr05: 54687273-54696286 Eucalyptus grandis
Eucgr.E03319 0.5kb upstream 0.5kb upstream 500 false Chr05: 54695787-54696286 Eucalyptus grandis
Eucgr.E03319 0.5kb downstream 0.5kb downstream 9014 true Chr05: 54686773-54695786 Eucalyptus grandis
Eucgr.E03319 0.5kb downstream 0.5kb downstream 500 false Chr05: 54686773-54687272 Eucalyptus grandis
Eucgr.E03319 1.0kb upstream 1.0kb upstream 9514 true Chr05: 54687273-54696786 Eucalyptus grandis
Eucgr.E03319 1.0kb upstream 1.0kb upstream 1000 false Chr05: 54695787-54696786 Eucalyptus grandis
Eucgr.E03319 1.0kb downstream 1.0kb downstream 9514 true Chr05: 54686273-54695786 Eucalyptus grandis
Eucgr.E03319 1.0kb downstream 1.0kb downstream 1000 false Chr05: 54686273-54687272 Eucalyptus grandis
Eucgr.E03319 2.0kb upstream 2.0kb upstream 10514 true Chr05: 54687273-54697786 Eucalyptus grandis
Eucgr.E03319 2.0kb upstream 2.0kb upstream 2000 false Chr05: 54695787-54697786 Eucalyptus grandis
Eucgr.E03319 2.0kb downstream 2.0kb downstream 10514 true Chr05: 54685273-54695786 Eucalyptus grandis
Eucgr.E03319 2.0kb downstream 2.0kb downstream 2000 false Chr05: 54685273-54687272 Eucalyptus grandis
Eucgr.E03319 5.0kb upstream 5.0kb upstream 13514 true Chr05: 54687273-54700786 Eucalyptus grandis
Eucgr.E03319 5.0kb upstream 5.0kb upstream 5000 false Chr05: 54695787-54700786 Eucalyptus grandis
Eucgr.E03319 5.0kb downstream 5.0kb downstream 13514 true Chr05: 54682273-54695786 Eucalyptus grandis
Eucgr.E03319 5.0kb downstream 5.0kb downstream 5000 false Chr05: 54682273-54687272 Eucalyptus grandis
Eucgr.E03319 10.0kb upstream 10.0kb upstream 18514 true Chr05: 54687273-54705786 Eucalyptus grandis
Eucgr.E03319 10.0kb upstream 10.0kb upstream 10000 false Chr05: 54695787-54705786 Eucalyptus grandis
Eucgr.E03319 10.0kb downstream 10.0kb downstream 18514 true Chr05: 54677273-54695786 Eucalyptus grandis
Eucgr.E03319 10.0kb downstream 10.0kb downstream 10000 false Chr05: 54677273-54687272 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050305 5270 Rosid View MSA
123738964 5271 Pentapetalae View MSA
122792527 5272 Eudicot View MSA
122045027 5273 Angiosperm View MSA
121345970 5274 Embryophyte View MSA
123425044 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.816744 0.0 2.30854    
cufflinks 0.686823 0.0 1.99811    
cufflinks 1.11034 0.0 3.05333    
cufflinks 0.964632 0.0 2.69582    
cufflinks 1.42679 0.0 3.8323    
cufflinks 18.0517 0.0 40.0046   High

0 Strain