Gene : Eucgr.E03294 E. grandis v2.0
Defline:  (1 of 2) PF00004//PF02933//PF07724 - ATPase family associated with various cellular activities (AAA) (AAA) // Cell division protein 48 (CDC48), domain 2 (CDC48_2) // AAA domain (Cdc48 subfamily) (AAA_2) Genomic Order:  2398
Name:  ? Eucgr.E03294 Secondary Identifier:  ? PAC:32031037
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E03294 0.5kb upstream 0.5kb upstream 10712 true Chr05: 54328026-54338737 Eucalyptus grandis
Eucgr.E03294 0.5kb upstream 0.5kb upstream 500 false Chr05: 54338238-54338737 Eucalyptus grandis
Eucgr.E03294 0.5kb downstream 0.5kb downstream 10712 true Chr05: 54327526-54338237 Eucalyptus grandis
Eucgr.E03294 0.5kb downstream 0.5kb downstream 500 false Chr05: 54327526-54328025 Eucalyptus grandis
Eucgr.E03294 1.0kb upstream 1.0kb upstream 11212 true Chr05: 54328026-54339237 Eucalyptus grandis
Eucgr.E03294 1.0kb upstream 1.0kb upstream 1000 false Chr05: 54338238-54339237 Eucalyptus grandis
Eucgr.E03294 1.0kb downstream 1.0kb downstream 11212 true Chr05: 54327026-54338237 Eucalyptus grandis
Eucgr.E03294 1.0kb downstream 1.0kb downstream 1000 false Chr05: 54327026-54328025 Eucalyptus grandis
Eucgr.E03294 2.0kb upstream 2.0kb upstream 12212 true Chr05: 54328026-54340237 Eucalyptus grandis
Eucgr.E03294 2.0kb upstream 2.0kb upstream 2000 false Chr05: 54338238-54340237 Eucalyptus grandis
Eucgr.E03294 2.0kb downstream 2.0kb downstream 12212 true Chr05: 54326026-54338237 Eucalyptus grandis
Eucgr.E03294 2.0kb downstream 2.0kb downstream 2000 false Chr05: 54326026-54328025 Eucalyptus grandis
Eucgr.E03294 5.0kb upstream 5.0kb upstream 15212 true Chr05: 54328026-54343237 Eucalyptus grandis
Eucgr.E03294 5.0kb upstream 5.0kb upstream 5000 false Chr05: 54338238-54343237 Eucalyptus grandis
Eucgr.E03294 5.0kb downstream 5.0kb downstream 15212 true Chr05: 54323026-54338237 Eucalyptus grandis
Eucgr.E03294 5.0kb downstream 5.0kb downstream 5000 false Chr05: 54323026-54328025 Eucalyptus grandis
Eucgr.E03294 10.0kb upstream 10.0kb upstream 20212 true Chr05: 54328026-54348237 Eucalyptus grandis
Eucgr.E03294 10.0kb upstream 10.0kb upstream 10000 false Chr05: 54338238-54348237 Eucalyptus grandis
Eucgr.E03294 10.0kb downstream 10.0kb downstream 20212 true Chr05: 54318026-54338237 Eucalyptus grandis
Eucgr.E03294 10.0kb downstream 10.0kb downstream 10000 false Chr05: 54318026-54328025 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065880 5270 Rosid View MSA
123748878 5271 Pentapetalae View MSA
122787277 5272 Eudicot View MSA
122044573 5273 Angiosperm View MSA
121350302 5274 Embryophyte View MSA
123424602 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.6976 0.0 28.313    
cufflinks 36.7305 0.0 82.1361   High
cufflinks 13.245 0.0 29.4667    
cufflinks 37.1583 0.0 83.1748   High
cufflinks 20.4427 0.0 45.208    
cufflinks 12.6976 0.0 28.3494    

0 Strain