Gene : Eucgr.E03313 E. grandis v2.0
Defline:  (1 of 1) PTHR20856:SF7 - DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2 Genomic Order:  2412
Name:  ? Eucgr.E03313 Secondary Identifier:  ? PAC:32031311
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E03313 0.5kb upstream 0.5kb upstream 9252 true Chr05: 54632210-54641461 Eucalyptus grandis
Eucgr.E03313 0.5kb upstream 0.5kb upstream 500 false Chr05: 54632210-54632709 Eucalyptus grandis
Eucgr.E03313 0.5kb downstream 0.5kb downstream 9252 true Chr05: 54632710-54641961 Eucalyptus grandis
Eucgr.E03313 0.5kb downstream 0.5kb downstream 500 false Chr05: 54641462-54641961 Eucalyptus grandis
Eucgr.E03313 1.0kb upstream 1.0kb upstream 9752 true Chr05: 54631710-54641461 Eucalyptus grandis
Eucgr.E03313 1.0kb upstream 1.0kb upstream 1000 false Chr05: 54631710-54632709 Eucalyptus grandis
Eucgr.E03313 1.0kb downstream 1.0kb downstream 9752 true Chr05: 54632710-54642461 Eucalyptus grandis
Eucgr.E03313 1.0kb downstream 1.0kb downstream 1000 false Chr05: 54641462-54642461 Eucalyptus grandis
Eucgr.E03313 2.0kb upstream 2.0kb upstream 10752 true Chr05: 54630710-54641461 Eucalyptus grandis
Eucgr.E03313 2.0kb upstream 2.0kb upstream 2000 false Chr05: 54630710-54632709 Eucalyptus grandis
Eucgr.E03313 2.0kb downstream 2.0kb downstream 10752 true Chr05: 54632710-54643461 Eucalyptus grandis
Eucgr.E03313 2.0kb downstream 2.0kb downstream 2000 false Chr05: 54641462-54643461 Eucalyptus grandis
Eucgr.E03313 5.0kb upstream 5.0kb upstream 13752 true Chr05: 54627710-54641461 Eucalyptus grandis
Eucgr.E03313 5.0kb upstream 5.0kb upstream 5000 false Chr05: 54627710-54632709 Eucalyptus grandis
Eucgr.E03313 5.0kb downstream 5.0kb downstream 13752 true Chr05: 54632710-54646461 Eucalyptus grandis
Eucgr.E03313 5.0kb downstream 5.0kb downstream 5000 false Chr05: 54641462-54646461 Eucalyptus grandis
Eucgr.E03313 10.0kb upstream 10.0kb upstream 18752 true Chr05: 54622710-54641461 Eucalyptus grandis
Eucgr.E03313 10.0kb upstream 10.0kb upstream 10000 false Chr05: 54622710-54632709 Eucalyptus grandis
Eucgr.E03313 10.0kb downstream 10.0kb downstream 18752 true Chr05: 54632710-54651461 Eucalyptus grandis
Eucgr.E03313 10.0kb downstream 10.0kb downstream 10000 false Chr05: 54641462-54651461 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061336 5270 Rosid View MSA
123743621 5271 Pentapetalae View MSA
122789803 5272 Eudicot View MSA
122041564 5273 Angiosperm View MSA
121347423 5274 Embryophyte View MSA
123428402 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.8691 0.0 62.0185    
cufflinks 17.3323 0.0 40.1971   Low
cufflinks 28.1855 0.0 64.2431 High High
cufflinks 18.5416 0.0 43.2151    
cufflinks 18.4726 0.0 42.8629    
cufflinks 28.2039 0.0 64.0518   High

0 Strain