Gene : Eucgr.E03316 E. grandis v2.0
Defline:  (1 of 2) PTHR13308:SF17 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 Genomic Order:  2415
Name:  ? Eucgr.E03316 Secondary Identifier:  ? PAC:32030151
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E03316 0.5kb upstream 0.5kb upstream 7579 true Chr05: 54675721-54683299 Eucalyptus grandis
Eucgr.E03316 0.5kb upstream 0.5kb upstream 500 false Chr05: 54682800-54683299 Eucalyptus grandis
Eucgr.E03316 0.5kb downstream 0.5kb downstream 7579 true Chr05: 54675221-54682799 Eucalyptus grandis
Eucgr.E03316 0.5kb downstream 0.5kb downstream 500 false Chr05: 54675221-54675720 Eucalyptus grandis
Eucgr.E03316 1.0kb upstream 1.0kb upstream 8079 true Chr05: 54675721-54683799 Eucalyptus grandis
Eucgr.E03316 1.0kb upstream 1.0kb upstream 1000 false Chr05: 54682800-54683799 Eucalyptus grandis
Eucgr.E03316 1.0kb downstream 1.0kb downstream 8079 true Chr05: 54674721-54682799 Eucalyptus grandis
Eucgr.E03316 1.0kb downstream 1.0kb downstream 1000 false Chr05: 54674721-54675720 Eucalyptus grandis
Eucgr.E03316 2.0kb upstream 2.0kb upstream 9079 true Chr05: 54675721-54684799 Eucalyptus grandis
Eucgr.E03316 2.0kb upstream 2.0kb upstream 2000 false Chr05: 54682800-54684799 Eucalyptus grandis
Eucgr.E03316 2.0kb downstream 2.0kb downstream 9079 true Chr05: 54673721-54682799 Eucalyptus grandis
Eucgr.E03316 2.0kb downstream 2.0kb downstream 2000 false Chr05: 54673721-54675720 Eucalyptus grandis
Eucgr.E03316 5.0kb upstream 5.0kb upstream 12079 true Chr05: 54675721-54687799 Eucalyptus grandis
Eucgr.E03316 5.0kb upstream 5.0kb upstream 5000 false Chr05: 54682800-54687799 Eucalyptus grandis
Eucgr.E03316 5.0kb downstream 5.0kb downstream 12079 true Chr05: 54670721-54682799 Eucalyptus grandis
Eucgr.E03316 5.0kb downstream 5.0kb downstream 5000 false Chr05: 54670721-54675720 Eucalyptus grandis
Eucgr.E03316 10.0kb upstream 10.0kb upstream 17079 true Chr05: 54675721-54692799 Eucalyptus grandis
Eucgr.E03316 10.0kb upstream 10.0kb upstream 10000 false Chr05: 54682800-54692799 Eucalyptus grandis
Eucgr.E03316 10.0kb downstream 10.0kb downstream 17079 true Chr05: 54665721-54682799 Eucalyptus grandis
Eucgr.E03316 10.0kb downstream 10.0kb downstream 10000 false Chr05: 54665721-54675720 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066526 5270 Rosid View MSA
123744370 5271 Pentapetalae View MSA
122786444 5272 Eudicot View MSA
122050833 5273 Angiosperm View MSA
121348139 5274 Embryophyte View MSA
123428671 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.86979 0.0 18.2135    
cufflinks 8.17989 0.0 19.9277    
cufflinks 6.96657 0.0 16.2019    
cufflinks 6.23794 0.0 14.5879    
cufflinks 7.13788 0.0 16.6945    
cufflinks 12.7551 0.0 29.4946   High

0 Strain