Gene : Eucgr.E03255 E. grandis v2.0
Defline:  (1 of 43) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) Genomic Order:  2367
Name:  ? Eucgr.E03255 Secondary Identifier:  ? PAC:32031764
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E03255 0.5kb upstream 0.5kb upstream 4856 true Chr05: 53678677-53683532 Eucalyptus grandis
Eucgr.E03255 0.5kb upstream 0.5kb upstream 500 false Chr05: 53678677-53679176 Eucalyptus grandis
Eucgr.E03255 0.5kb downstream 0.5kb downstream 4856 true Chr05: 53679177-53684032 Eucalyptus grandis
Eucgr.E03255 0.5kb downstream 0.5kb downstream 500 false Chr05: 53683533-53684032 Eucalyptus grandis
Eucgr.E03255 1.0kb upstream 1.0kb upstream 5356 true Chr05: 53678177-53683532 Eucalyptus grandis
Eucgr.E03255 1.0kb upstream 1.0kb upstream 1000 false Chr05: 53678177-53679176 Eucalyptus grandis
Eucgr.E03255 1.0kb downstream 1.0kb downstream 5356 true Chr05: 53679177-53684532 Eucalyptus grandis
Eucgr.E03255 1.0kb downstream 1.0kb downstream 1000 false Chr05: 53683533-53684532 Eucalyptus grandis
Eucgr.E03255 2.0kb upstream 2.0kb upstream 6356 true Chr05: 53677177-53683532 Eucalyptus grandis
Eucgr.E03255 2.0kb upstream 2.0kb upstream 2000 false Chr05: 53677177-53679176 Eucalyptus grandis
Eucgr.E03255 2.0kb downstream 2.0kb downstream 6356 true Chr05: 53679177-53685532 Eucalyptus grandis
Eucgr.E03255 2.0kb downstream 2.0kb downstream 2000 false Chr05: 53683533-53685532 Eucalyptus grandis
Eucgr.E03255 5.0kb upstream 5.0kb upstream 9356 true Chr05: 53674177-53683532 Eucalyptus grandis
Eucgr.E03255 5.0kb upstream 5.0kb upstream 5000 false Chr05: 53674177-53679176 Eucalyptus grandis
Eucgr.E03255 5.0kb downstream 5.0kb downstream 9356 true Chr05: 53679177-53688532 Eucalyptus grandis
Eucgr.E03255 5.0kb downstream 5.0kb downstream 5000 false Chr05: 53683533-53688532 Eucalyptus grandis
Eucgr.E03255 10.0kb upstream 10.0kb upstream 14356 true Chr05: 53669177-53683532 Eucalyptus grandis
Eucgr.E03255 10.0kb upstream 10.0kb upstream 10000 false Chr05: 53669177-53679176 Eucalyptus grandis
Eucgr.E03255 10.0kb downstream 10.0kb downstream 14356 true Chr05: 53679177-53693532 Eucalyptus grandis
Eucgr.E03255 10.0kb downstream 10.0kb downstream 10000 false Chr05: 53683533-53693532 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062479 5270 Rosid View MSA
123743677 5271 Pentapetalae View MSA
122786281 5272 Eudicot View MSA
122049503 5273 Angiosperm View MSA
121348511 5274 Embryophyte View MSA
123426548 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.8854 0.0 46.2501    
cufflinks 17.2392 0.0 38.1273    
cufflinks 29.9183 0.0 66.9244 High  
cufflinks 34.1866 0.0 77.1039   High
cufflinks 15.4994 0.0 34.2788    
cufflinks 6.77536 0.0 15.416   Low

0 Strain