Gene : Eucgr.E03165 E. grandis v2.0
Defline:  (1 of 2) PTHR10472 - D-TYROSYL-TRNA TYR DEACYLASE Genomic Order:  2297
Name:  ? Eucgr.E03165 Secondary Identifier:  ? PAC:32030875
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E03165 0.5kb upstream 0.5kb upstream 2676 true Chr05: 52249502-52252177 Eucalyptus grandis
Eucgr.E03165 0.5kb upstream 0.5kb upstream 500 false Chr05: 52249502-52250001 Eucalyptus grandis
Eucgr.E03165 0.5kb downstream 0.5kb downstream 2676 true Chr05: 52250002-52252677 Eucalyptus grandis
Eucgr.E03165 0.5kb downstream 0.5kb downstream 500 false Chr05: 52252178-52252677 Eucalyptus grandis
Eucgr.E03165 1.0kb upstream 1.0kb upstream 3176 true Chr05: 52249002-52252177 Eucalyptus grandis
Eucgr.E03165 1.0kb upstream 1.0kb upstream 1000 false Chr05: 52249002-52250001 Eucalyptus grandis
Eucgr.E03165 1.0kb downstream 1.0kb downstream 3176 true Chr05: 52250002-52253177 Eucalyptus grandis
Eucgr.E03165 1.0kb downstream 1.0kb downstream 1000 false Chr05: 52252178-52253177 Eucalyptus grandis
Eucgr.E03165 2.0kb upstream 2.0kb upstream 4176 true Chr05: 52248002-52252177 Eucalyptus grandis
Eucgr.E03165 2.0kb upstream 2.0kb upstream 2000 false Chr05: 52248002-52250001 Eucalyptus grandis
Eucgr.E03165 2.0kb downstream 2.0kb downstream 4176 true Chr05: 52250002-52254177 Eucalyptus grandis
Eucgr.E03165 2.0kb downstream 2.0kb downstream 2000 false Chr05: 52252178-52254177 Eucalyptus grandis
Eucgr.E03165 5.0kb upstream 5.0kb upstream 7176 true Chr05: 52245002-52252177 Eucalyptus grandis
Eucgr.E03165 5.0kb upstream 5.0kb upstream 5000 false Chr05: 52245002-52250001 Eucalyptus grandis
Eucgr.E03165 5.0kb downstream 5.0kb downstream 7176 true Chr05: 52250002-52257177 Eucalyptus grandis
Eucgr.E03165 5.0kb downstream 5.0kb downstream 5000 false Chr05: 52252178-52257177 Eucalyptus grandis
Eucgr.E03165 10.0kb upstream 10.0kb upstream 12176 true Chr05: 52240002-52252177 Eucalyptus grandis
Eucgr.E03165 10.0kb upstream 10.0kb upstream 10000 false Chr05: 52240002-52250001 Eucalyptus grandis
Eucgr.E03165 10.0kb downstream 10.0kb downstream 12176 true Chr05: 52250002-52262177 Eucalyptus grandis
Eucgr.E03165 10.0kb downstream 10.0kb downstream 10000 false Chr05: 52252178-52262177 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067908 5270 Rosid View MSA
123739614 5271 Pentapetalae View MSA
122785826 5272 Eudicot View MSA
122044968 5273 Angiosperm View MSA
121347262 5274 Embryophyte View MSA
123424292 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.6383 0.0 30.9705    
cufflinks 5.37448 0.0 15.1148   Low
cufflinks 13.4041 0.0 32.1933   High
cufflinks 5.05254 0.0 14.1497   Low
cufflinks 7.99778 0.0 20.9231    
cufflinks 10.2167 0.0 25.663    

0 Strain