Gene : Eucgr.E03104 E. grandis v2.0
Defline:  (1 of 3) PTHR10871:SF6 - 40S RIBOSOMAL PROTEIN S18 Genomic Order:  2452
Name:  ? Eucgr.E03104 Secondary Identifier:  ? PAC:32029209
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E03104 0.5kb upstream 0.5kb upstream 2701 true Chr05: 56487048-56489748 Eucalyptus grandis
Eucgr.E03104 0.5kb upstream 0.5kb upstream 500 false Chr05: 56487048-56487547 Eucalyptus grandis
Eucgr.E03104 0.5kb downstream 0.5kb downstream 2701 true Chr05: 56487548-56490248 Eucalyptus grandis
Eucgr.E03104 0.5kb downstream 0.5kb downstream 500 false Chr05: 56489749-56490248 Eucalyptus grandis
Eucgr.E03104 1.0kb upstream 1.0kb upstream 3201 true Chr05: 56486548-56489748 Eucalyptus grandis
Eucgr.E03104 1.0kb upstream 1.0kb upstream 1000 false Chr05: 56486548-56487547 Eucalyptus grandis
Eucgr.E03104 1.0kb downstream 1.0kb downstream 3201 true Chr05: 56487548-56490748 Eucalyptus grandis
Eucgr.E03104 1.0kb downstream 1.0kb downstream 1000 false Chr05: 56489749-56490748 Eucalyptus grandis
Eucgr.E03104 2.0kb upstream 2.0kb upstream 4201 true Chr05: 56485548-56489748 Eucalyptus grandis
Eucgr.E03104 2.0kb upstream 2.0kb upstream 2000 false Chr05: 56485548-56487547 Eucalyptus grandis
Eucgr.E03104 2.0kb downstream 2.0kb downstream 4201 true Chr05: 56487548-56491748 Eucalyptus grandis
Eucgr.E03104 2.0kb downstream 2.0kb downstream 2000 false Chr05: 56489749-56491748 Eucalyptus grandis
Eucgr.E03104 5.0kb upstream 5.0kb upstream 7201 true Chr05: 56482548-56489748 Eucalyptus grandis
Eucgr.E03104 5.0kb upstream 5.0kb upstream 5000 false Chr05: 56482548-56487547 Eucalyptus grandis
Eucgr.E03104 5.0kb downstream 5.0kb downstream 7201 true Chr05: 56487548-56494748 Eucalyptus grandis
Eucgr.E03104 5.0kb downstream 5.0kb downstream 5000 false Chr05: 56489749-56494748 Eucalyptus grandis
Eucgr.E03104 10.0kb upstream 10.0kb upstream 12201 true Chr05: 56477548-56489748 Eucalyptus grandis
Eucgr.E03104 10.0kb upstream 10.0kb upstream 10000 false Chr05: 56477548-56487547 Eucalyptus grandis
Eucgr.E03104 10.0kb downstream 10.0kb downstream 12201 true Chr05: 56487548-56499748 Eucalyptus grandis
Eucgr.E03104 10.0kb downstream 10.0kb downstream 10000 false Chr05: 56489749-56499748 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071434 5270 Rosid View MSA
123753104 5271 Pentapetalae View MSA
122796798 5272 Eudicot View MSA
122048414 5273 Angiosperm View MSA
121348769 5274 Embryophyte View MSA
123423828 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 51.7438 0.0 114.764 High  
cufflinks 23.6178 0.0 54.1786   Low
cufflinks 41.2828 0.0 92.0483 High  
cufflinks 51.9876 0.0 115.212 High  
cufflinks 100.383 0.0 222.822 High High
cufflinks 43.9944 0.0 97.9274 High  

0 Strain