Gene : Eucgr.E02846 E. grandis v2.0
Defline:  (1 of 2) PTHR12858 - RIBOSOME BIOGENESIS PROTEIN Genomic Order:  2140
Name:  ? Eucgr.E02846 Secondary Identifier:  ? PAC:32029687
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E02846 0.5kb upstream 0.5kb upstream 8311 true Chr05: 47024873-47033183 Eucalyptus grandis
Eucgr.E02846 0.5kb upstream 0.5kb upstream 500 false Chr05: 47032684-47033183 Eucalyptus grandis
Eucgr.E02846 0.5kb downstream 0.5kb downstream 8311 true Chr05: 47024373-47032683 Eucalyptus grandis
Eucgr.E02846 0.5kb downstream 0.5kb downstream 500 false Chr05: 47024373-47024872 Eucalyptus grandis
Eucgr.E02846 1.0kb upstream 1.0kb upstream 8811 true Chr05: 47024873-47033683 Eucalyptus grandis
Eucgr.E02846 1.0kb upstream 1.0kb upstream 1000 false Chr05: 47032684-47033683 Eucalyptus grandis
Eucgr.E02846 1.0kb downstream 1.0kb downstream 8811 true Chr05: 47023873-47032683 Eucalyptus grandis
Eucgr.E02846 1.0kb downstream 1.0kb downstream 1000 false Chr05: 47023873-47024872 Eucalyptus grandis
Eucgr.E02846 2.0kb upstream 2.0kb upstream 9811 true Chr05: 47024873-47034683 Eucalyptus grandis
Eucgr.E02846 2.0kb upstream 2.0kb upstream 2000 false Chr05: 47032684-47034683 Eucalyptus grandis
Eucgr.E02846 2.0kb downstream 2.0kb downstream 9811 true Chr05: 47022873-47032683 Eucalyptus grandis
Eucgr.E02846 2.0kb downstream 2.0kb downstream 2000 false Chr05: 47022873-47024872 Eucalyptus grandis
Eucgr.E02846 5.0kb upstream 5.0kb upstream 12811 true Chr05: 47024873-47037683 Eucalyptus grandis
Eucgr.E02846 5.0kb upstream 5.0kb upstream 5000 false Chr05: 47032684-47037683 Eucalyptus grandis
Eucgr.E02846 5.0kb downstream 5.0kb downstream 12811 true Chr05: 47019873-47032683 Eucalyptus grandis
Eucgr.E02846 5.0kb downstream 5.0kb downstream 5000 false Chr05: 47019873-47024872 Eucalyptus grandis
Eucgr.E02846 10.0kb upstream 10.0kb upstream 17811 true Chr05: 47024873-47042683 Eucalyptus grandis
Eucgr.E02846 10.0kb upstream 10.0kb upstream 10000 false Chr05: 47032684-47042683 Eucalyptus grandis
Eucgr.E02846 10.0kb downstream 10.0kb downstream 17811 true Chr05: 47014873-47032683 Eucalyptus grandis
Eucgr.E02846 10.0kb downstream 10.0kb downstream 10000 false Chr05: 47014873-47024872 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066682 5270 Rosid View MSA
123739487 5271 Pentapetalae View MSA
122792975 5272 Eudicot View MSA
122044889 5273 Angiosperm View MSA
121347720 5274 Embryophyte View MSA
123428215 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.0341 0.0 33.9647   High
cufflinks 11.0832 0.0 24.9026    
cufflinks 15.0201 0.0 33.878   High
cufflinks 8.98776 0.0 20.5657   Low
cufflinks 8.87628 0.0 20.3601   Low
cufflinks 12.9431 0.0 28.9813    

0 Strain