Gene : Eucgr.E02852 E. grandis v2.0
Defline:  (1 of 4) PTHR28141:SF1 - 2',3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE Genomic Order:  2135
Name:  ? Eucgr.E02852 Secondary Identifier:  ? PAC:32030065
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E02852 0.5kb upstream 0.5kb upstream 3926 true Chr05: 46934832-46938757 Eucalyptus grandis
Eucgr.E02852 0.5kb upstream 0.5kb upstream 500 false Chr05: 46938258-46938757 Eucalyptus grandis
Eucgr.E02852 0.5kb downstream 0.5kb downstream 3926 true Chr05: 46934332-46938257 Eucalyptus grandis
Eucgr.E02852 0.5kb downstream 0.5kb downstream 500 false Chr05: 46934332-46934831 Eucalyptus grandis
Eucgr.E02852 1.0kb upstream 1.0kb upstream 4426 true Chr05: 46934832-46939257 Eucalyptus grandis
Eucgr.E02852 1.0kb upstream 1.0kb upstream 1000 false Chr05: 46938258-46939257 Eucalyptus grandis
Eucgr.E02852 1.0kb downstream 1.0kb downstream 4426 true Chr05: 46933832-46938257 Eucalyptus grandis
Eucgr.E02852 1.0kb downstream 1.0kb downstream 1000 false Chr05: 46933832-46934831 Eucalyptus grandis
Eucgr.E02852 2.0kb upstream 2.0kb upstream 5426 true Chr05: 46934832-46940257 Eucalyptus grandis
Eucgr.E02852 2.0kb upstream 2.0kb upstream 2000 false Chr05: 46938258-46940257 Eucalyptus grandis
Eucgr.E02852 2.0kb downstream 2.0kb downstream 5426 true Chr05: 46932832-46938257 Eucalyptus grandis
Eucgr.E02852 2.0kb downstream 2.0kb downstream 2000 false Chr05: 46932832-46934831 Eucalyptus grandis
Eucgr.E02852 5.0kb upstream 5.0kb upstream 8426 true Chr05: 46934832-46943257 Eucalyptus grandis
Eucgr.E02852 5.0kb upstream 5.0kb upstream 5000 false Chr05: 46938258-46943257 Eucalyptus grandis
Eucgr.E02852 5.0kb downstream 5.0kb downstream 8426 true Chr05: 46929832-46938257 Eucalyptus grandis
Eucgr.E02852 5.0kb downstream 5.0kb downstream 5000 false Chr05: 46929832-46934831 Eucalyptus grandis
Eucgr.E02852 10.0kb upstream 10.0kb upstream 13426 true Chr05: 46934832-46948257 Eucalyptus grandis
Eucgr.E02852 10.0kb upstream 10.0kb upstream 10000 false Chr05: 46938258-46948257 Eucalyptus grandis
Eucgr.E02852 10.0kb downstream 10.0kb downstream 13426 true Chr05: 46924832-46938257 Eucalyptus grandis
Eucgr.E02852 10.0kb downstream 10.0kb downstream 10000 false Chr05: 46924832-46934831 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065513 5270 Rosid View MSA
123741302 5271 Pentapetalae View MSA
122793487 5272 Eudicot View MSA
122041561 5273 Angiosperm View MSA
123429145 5275 Viridiplantae View MSA
121349919 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.01347 0.0 3.24931    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.37938 0.0 6.93442    
cufflinks 1.28383 0.0 4.03422    
cufflinks 8.90633 0.0 22.7029   High
cufflinks 1.38669 0.0 4.24594    

0 Strain