Gene : Eucgr.E03852 E. grandis v2.0
Defline:  (1 of 3) PTHR23180:SF249 - ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD11-RELATED Genomic Order:  3131
Name:  ? Eucgr.E03852 Secondary Identifier:  ? PAC:32031872
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E03852 0.5kb upstream 0.5kb upstream 3560 true Chr05: 73142710-73146269 Eucalyptus grandis
Eucgr.E03852 0.5kb upstream 0.5kb upstream 500 false Chr05: 73142710-73143209 Eucalyptus grandis
Eucgr.E03852 0.5kb downstream 0.5kb downstream 3560 true Chr05: 73143210-73146769 Eucalyptus grandis
Eucgr.E03852 0.5kb downstream 0.5kb downstream 500 false Chr05: 73146270-73146769 Eucalyptus grandis
Eucgr.E03852 1.0kb upstream 1.0kb upstream 4060 true Chr05: 73142210-73146269 Eucalyptus grandis
Eucgr.E03852 1.0kb upstream 1.0kb upstream 1000 false Chr05: 73142210-73143209 Eucalyptus grandis
Eucgr.E03852 1.0kb downstream 1.0kb downstream 4060 true Chr05: 73143210-73147269 Eucalyptus grandis
Eucgr.E03852 1.0kb downstream 1.0kb downstream 1000 false Chr05: 73146270-73147269 Eucalyptus grandis
Eucgr.E03852 2.0kb upstream 2.0kb upstream 5060 true Chr05: 73141210-73146269 Eucalyptus grandis
Eucgr.E03852 2.0kb upstream 2.0kb upstream 2000 false Chr05: 73141210-73143209 Eucalyptus grandis
Eucgr.E03852 2.0kb downstream 2.0kb downstream 5060 true Chr05: 73143210-73148269 Eucalyptus grandis
Eucgr.E03852 2.0kb downstream 2.0kb downstream 2000 false Chr05: 73146270-73148269 Eucalyptus grandis
Eucgr.E03852 5.0kb upstream 5.0kb upstream 8060 true Chr05: 73138210-73146269 Eucalyptus grandis
Eucgr.E03852 5.0kb upstream 5.0kb upstream 5000 false Chr05: 73138210-73143209 Eucalyptus grandis
Eucgr.E03852 5.0kb downstream 5.0kb downstream 8060 true Chr05: 73143210-73151269 Eucalyptus grandis
Eucgr.E03852 5.0kb downstream 5.0kb downstream 5000 false Chr05: 73146270-73151269 Eucalyptus grandis
Eucgr.E03852 10.0kb upstream 10.0kb upstream 13060 true Chr05: 73133210-73146269 Eucalyptus grandis
Eucgr.E03852 10.0kb upstream 10.0kb upstream 10000 false Chr05: 73133210-73143209 Eucalyptus grandis
Eucgr.E03852 10.0kb downstream 10.0kb downstream 13060 true Chr05: 73143210-73156269 Eucalyptus grandis
Eucgr.E03852 10.0kb downstream 10.0kb downstream 10000 false Chr05: 73146270-73156269 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063417 5270 Rosid View MSA
123745125 5271 Pentapetalae View MSA
122791295 5272 Eudicot View MSA
122045342 5273 Angiosperm View MSA
121310436 5274 Embryophyte View MSA
123347920 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.11486 0.0 3.99392    
cufflinks 1.55676 0.0 5.27327    
cufflinks 2.5821 0.0 7.79882    
cufflinks 0.236592 0.0 1.22304 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain