Gene : Eucgr.E03845 E. grandis v2.0
Defline:  (1 of 11) PF05701 - Weak chloroplast movement under blue light (WEMBL) Genomic Order:  3138
Name:  ? Eucgr.E03845 Secondary Identifier:  ? PAC:32029601
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E03845 0.5kb upstream 0.5kb upstream 2357 true Chr05: 73205292-73207648 Eucalyptus grandis
Eucgr.E03845 0.5kb upstream 0.5kb upstream 500 false Chr05: 73205292-73205791 Eucalyptus grandis
Eucgr.E03845 0.5kb downstream 0.5kb downstream 2357 true Chr05: 73205792-73208148 Eucalyptus grandis
Eucgr.E03845 0.5kb downstream 0.5kb downstream 500 false Chr05: 73207649-73208148 Eucalyptus grandis
Eucgr.E03845 1.0kb upstream 1.0kb upstream 2857 true Chr05: 73204792-73207648 Eucalyptus grandis
Eucgr.E03845 1.0kb upstream 1.0kb upstream 1000 false Chr05: 73204792-73205791 Eucalyptus grandis
Eucgr.E03845 1.0kb downstream 1.0kb downstream 2857 true Chr05: 73205792-73208648 Eucalyptus grandis
Eucgr.E03845 1.0kb downstream 1.0kb downstream 1000 false Chr05: 73207649-73208648 Eucalyptus grandis
Eucgr.E03845 2.0kb upstream 2.0kb upstream 3857 true Chr05: 73203792-73207648 Eucalyptus grandis
Eucgr.E03845 2.0kb upstream 2.0kb upstream 2000 false Chr05: 73203792-73205791 Eucalyptus grandis
Eucgr.E03845 2.0kb downstream 2.0kb downstream 3857 true Chr05: 73205792-73209648 Eucalyptus grandis
Eucgr.E03845 2.0kb downstream 2.0kb downstream 2000 false Chr05: 73207649-73209648 Eucalyptus grandis
Eucgr.E03845 5.0kb upstream 5.0kb upstream 6857 true Chr05: 73200792-73207648 Eucalyptus grandis
Eucgr.E03845 5.0kb upstream 5.0kb upstream 5000 false Chr05: 73200792-73205791 Eucalyptus grandis
Eucgr.E03845 5.0kb downstream 5.0kb downstream 6857 true Chr05: 73205792-73212648 Eucalyptus grandis
Eucgr.E03845 5.0kb downstream 5.0kb downstream 5000 false Chr05: 73207649-73212648 Eucalyptus grandis
Eucgr.E03845 10.0kb upstream 10.0kb upstream 11857 true Chr05: 73195792-73207648 Eucalyptus grandis
Eucgr.E03845 10.0kb upstream 10.0kb upstream 10000 false Chr05: 73195792-73205791 Eucalyptus grandis
Eucgr.E03845 10.0kb downstream 10.0kb downstream 11857 true Chr05: 73205792-73217648 Eucalyptus grandis
Eucgr.E03845 10.0kb downstream 10.0kb downstream 10000 false Chr05: 73207649-73217648 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780545 5273 Angiosperm View MSA
124050263 5270 Rosid View MSA
123746693 5271 Pentapetalae View MSA
122772010 5272 Eudicot View MSA
121351750 5274 Embryophyte View MSA
123382308 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.48759 0.0 4.0061   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.137987 0.0 0.492599 Low  
cufflinks 0.301773 0.0 0.968016 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain