Gene : Eucgr.E01006 E. grandis v2.0
Defline:  (1 of 3) PTHR11945:SF97 - FLORAL HOMEOTIC PROTEIN PISTILLATA Genomic Order:  3875
Name:  ? Eucgr.E01006 Secondary Identifier:  ? PAC:32052854
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E01006 0.5kb upstream 0.5kb upstream 4287 true Chr06: 55003061-55007347 Eucalyptus grandis
Eucgr.E01006 0.5kb upstream 0.5kb upstream 500 false Chr06: 55006848-55007347 Eucalyptus grandis
Eucgr.E01006 0.5kb downstream 0.5kb downstream 4287 true Chr06: 55002561-55006847 Eucalyptus grandis
Eucgr.E01006 0.5kb downstream 0.5kb downstream 500 false Chr06: 55002561-55003060 Eucalyptus grandis
Eucgr.E01006 1.0kb upstream 1.0kb upstream 4787 true Chr06: 55003061-55007847 Eucalyptus grandis
Eucgr.E01006 1.0kb upstream 1.0kb upstream 1000 false Chr06: 55006848-55007847 Eucalyptus grandis
Eucgr.E01006 1.0kb downstream 1.0kb downstream 4787 true Chr06: 55002061-55006847 Eucalyptus grandis
Eucgr.E01006 1.0kb downstream 1.0kb downstream 1000 false Chr06: 55002061-55003060 Eucalyptus grandis
Eucgr.E01006 2.0kb upstream 2.0kb upstream 5787 true Chr06: 55003061-55008847 Eucalyptus grandis
Eucgr.E01006 2.0kb upstream 2.0kb upstream 2000 false Chr06: 55006848-55008847 Eucalyptus grandis
Eucgr.E01006 2.0kb downstream 2.0kb downstream 5787 true Chr06: 55001061-55006847 Eucalyptus grandis
Eucgr.E01006 2.0kb downstream 2.0kb downstream 2000 false Chr06: 55001061-55003060 Eucalyptus grandis
Eucgr.E01006 5.0kb upstream 5.0kb upstream 8787 true Chr06: 55003061-55011847 Eucalyptus grandis
Eucgr.E01006 5.0kb upstream 5.0kb upstream 5000 false Chr06: 55006848-55011847 Eucalyptus grandis
Eucgr.E01006 5.0kb downstream 5.0kb downstream 8787 true Chr06: 54998061-55006847 Eucalyptus grandis
Eucgr.E01006 5.0kb downstream 5.0kb downstream 5000 false Chr06: 54998061-55003060 Eucalyptus grandis
Eucgr.E01006 10.0kb upstream 10.0kb upstream 13787 true Chr06: 55003061-55016847 Eucalyptus grandis
Eucgr.E01006 10.0kb upstream 10.0kb upstream 10000 false Chr06: 55006848-55016847 Eucalyptus grandis
Eucgr.E01006 10.0kb downstream 10.0kb downstream 13787 true Chr06: 54993061-55006847 Eucalyptus grandis
Eucgr.E01006 10.0kb downstream 10.0kb downstream 10000 false Chr06: 54993061-55003060 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070458 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.7363 0.0 40.4258   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 12.6847 0.0 37.0465    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 14.5412 0.0 33.7306    

0 Strain