Gene : Eucgr.E01007 E. grandis v2.0
Defline:  (1 of 3) PTHR11945:SF97 - FLORAL HOMEOTIC PROTEIN PISTILLATA Genomic Order:  3876
Name:  ? Eucgr.E01007 Secondary Identifier:  ? PAC:32054688
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E01007 0.5kb upstream 0.5kb upstream 3863 true Chr06: 55008658-55012520 Eucalyptus grandis
Eucgr.E01007 0.5kb upstream 0.5kb upstream 500 false Chr06: 55012021-55012520 Eucalyptus grandis
Eucgr.E01007 0.5kb downstream 0.5kb downstream 3863 true Chr06: 55008158-55012020 Eucalyptus grandis
Eucgr.E01007 0.5kb downstream 0.5kb downstream 500 false Chr06: 55008158-55008657 Eucalyptus grandis
Eucgr.E01007 1.0kb upstream 1.0kb upstream 4363 true Chr06: 55008658-55013020 Eucalyptus grandis
Eucgr.E01007 1.0kb upstream 1.0kb upstream 1000 false Chr06: 55012021-55013020 Eucalyptus grandis
Eucgr.E01007 1.0kb downstream 1.0kb downstream 4363 true Chr06: 55007658-55012020 Eucalyptus grandis
Eucgr.E01007 1.0kb downstream 1.0kb downstream 1000 false Chr06: 55007658-55008657 Eucalyptus grandis
Eucgr.E01007 2.0kb upstream 2.0kb upstream 5363 true Chr06: 55008658-55014020 Eucalyptus grandis
Eucgr.E01007 2.0kb upstream 2.0kb upstream 2000 false Chr06: 55012021-55014020 Eucalyptus grandis
Eucgr.E01007 2.0kb downstream 2.0kb downstream 5363 true Chr06: 55006658-55012020 Eucalyptus grandis
Eucgr.E01007 2.0kb downstream 2.0kb downstream 2000 false Chr06: 55006658-55008657 Eucalyptus grandis
Eucgr.E01007 5.0kb upstream 5.0kb upstream 8363 true Chr06: 55008658-55017020 Eucalyptus grandis
Eucgr.E01007 5.0kb upstream 5.0kb upstream 5000 false Chr06: 55012021-55017020 Eucalyptus grandis
Eucgr.E01007 5.0kb downstream 5.0kb downstream 8363 true Chr06: 55003658-55012020 Eucalyptus grandis
Eucgr.E01007 5.0kb downstream 5.0kb downstream 5000 false Chr06: 55003658-55008657 Eucalyptus grandis
Eucgr.E01007 10.0kb upstream 10.0kb upstream 13363 true Chr06: 55008658-55022020 Eucalyptus grandis
Eucgr.E01007 10.0kb upstream 10.0kb upstream 10000 false Chr06: 55012021-55022020 Eucalyptus grandis
Eucgr.E01007 10.0kb downstream 10.0kb downstream 13363 true Chr06: 54998658-55012020 Eucalyptus grandis
Eucgr.E01007 10.0kb downstream 10.0kb downstream 10000 false Chr06: 54998658-55008657 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070458 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.472846 0.0 1.61097 Low  
cufflinks 0.698997 0.0 2.25039 Low  
cufflinks 0.220943 0.0 0.828213 Low  
cufflinks 5.28396E-5 0.0 0.00834407 Low Low
cufflinks 1.28931 0.0 3.84338    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain