Gene : Eucgr.E00956 E. grandis v2.0
Defline:  (1 of 17) PF10382 - Protein of unknown function (DUF2439) (DUF2439) Genomic Order:  3836
Name:  ? Eucgr.E00956 Secondary Identifier:  ? PAC:32054757
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00956 0.5kb upstream 0.5kb upstream 6239 true Chr06: 54252085-54258323 Eucalyptus grandis
Eucgr.E00956 0.5kb upstream 0.5kb upstream 500 false Chr06: 54257824-54258323 Eucalyptus grandis
Eucgr.E00956 0.5kb downstream 0.5kb downstream 6239 true Chr06: 54251585-54257823 Eucalyptus grandis
Eucgr.E00956 0.5kb downstream 0.5kb downstream 500 false Chr06: 54251585-54252084 Eucalyptus grandis
Eucgr.E00956 1.0kb upstream 1.0kb upstream 6739 true Chr06: 54252085-54258823 Eucalyptus grandis
Eucgr.E00956 1.0kb upstream 1.0kb upstream 1000 false Chr06: 54257824-54258823 Eucalyptus grandis
Eucgr.E00956 1.0kb downstream 1.0kb downstream 6739 true Chr06: 54251085-54257823 Eucalyptus grandis
Eucgr.E00956 1.0kb downstream 1.0kb downstream 1000 false Chr06: 54251085-54252084 Eucalyptus grandis
Eucgr.E00956 2.0kb upstream 2.0kb upstream 7739 true Chr06: 54252085-54259823 Eucalyptus grandis
Eucgr.E00956 2.0kb upstream 2.0kb upstream 2000 false Chr06: 54257824-54259823 Eucalyptus grandis
Eucgr.E00956 2.0kb downstream 2.0kb downstream 7739 true Chr06: 54250085-54257823 Eucalyptus grandis
Eucgr.E00956 2.0kb downstream 2.0kb downstream 2000 false Chr06: 54250085-54252084 Eucalyptus grandis
Eucgr.E00956 5.0kb upstream 5.0kb upstream 10739 true Chr06: 54252085-54262823 Eucalyptus grandis
Eucgr.E00956 5.0kb upstream 5.0kb upstream 5000 false Chr06: 54257824-54262823 Eucalyptus grandis
Eucgr.E00956 5.0kb downstream 5.0kb downstream 10739 true Chr06: 54247085-54257823 Eucalyptus grandis
Eucgr.E00956 5.0kb downstream 5.0kb downstream 5000 false Chr06: 54247085-54252084 Eucalyptus grandis
Eucgr.E00956 10.0kb upstream 10.0kb upstream 15739 true Chr06: 54252085-54267823 Eucalyptus grandis
Eucgr.E00956 10.0kb upstream 10.0kb upstream 10000 false Chr06: 54257824-54267823 Eucalyptus grandis
Eucgr.E00956 10.0kb downstream 10.0kb downstream 15739 true Chr06: 54242085-54257823 Eucalyptus grandis
Eucgr.E00956 10.0kb downstream 10.0kb downstream 10000 false Chr06: 54242085-54252084 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027215 5273 Angiosperm View MSA
124050565 5270 Rosid View MSA
123750964 5271 Pentapetalae View MSA
122795180 5272 Eudicot View MSA
121296903 5274 Embryophyte View MSA
123335011 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.652094 0.0 1.9187    
cufflinks 0.617555 0.0 1.81786 Low  
cufflinks 0.381745 0.0 1.18841   Low
cufflinks 0.603732 0.0 1.77541    
cufflinks 1.4888 0.0 4.00617   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain