Gene : Eucgr.K01960 E. grandis v2.0
Defline:  (1 of 4) PF01055//PF16863 - Glycosyl hydrolases family 31 (Glyco_hydro_31) // N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase (NtCtMGAM_N) Genomic Order:  1673
Name:  ? Eucgr.K01960 Secondary Identifier:  ? PAC:32028025
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01960 0.5kb upstream 0.5kb upstream 6097 true Chr05: 31524700-31530796 Eucalyptus grandis
Eucgr.K01960 0.5kb upstream 0.5kb upstream 500 false Chr05: 31524700-31525199 Eucalyptus grandis
Eucgr.K01960 0.5kb downstream 0.5kb downstream 6097 true Chr05: 31525200-31531296 Eucalyptus grandis
Eucgr.K01960 0.5kb downstream 0.5kb downstream 500 false Chr05: 31530797-31531296 Eucalyptus grandis
Eucgr.K01960 1.0kb upstream 1.0kb upstream 6597 true Chr05: 31524200-31530796 Eucalyptus grandis
Eucgr.K01960 1.0kb upstream 1.0kb upstream 1000 false Chr05: 31524200-31525199 Eucalyptus grandis
Eucgr.K01960 1.0kb downstream 1.0kb downstream 6597 true Chr05: 31525200-31531796 Eucalyptus grandis
Eucgr.K01960 1.0kb downstream 1.0kb downstream 1000 false Chr05: 31530797-31531796 Eucalyptus grandis
Eucgr.K01960 2.0kb upstream 2.0kb upstream 7597 true Chr05: 31523200-31530796 Eucalyptus grandis
Eucgr.K01960 2.0kb upstream 2.0kb upstream 2000 false Chr05: 31523200-31525199 Eucalyptus grandis
Eucgr.K01960 2.0kb downstream 2.0kb downstream 7597 true Chr05: 31525200-31532796 Eucalyptus grandis
Eucgr.K01960 2.0kb downstream 2.0kb downstream 2000 false Chr05: 31530797-31532796 Eucalyptus grandis
Eucgr.K01960 5.0kb upstream 5.0kb upstream 10597 true Chr05: 31520200-31530796 Eucalyptus grandis
Eucgr.K01960 5.0kb upstream 5.0kb upstream 5000 false Chr05: 31520200-31525199 Eucalyptus grandis
Eucgr.K01960 5.0kb downstream 5.0kb downstream 10597 true Chr05: 31525200-31535796 Eucalyptus grandis
Eucgr.K01960 5.0kb downstream 5.0kb downstream 5000 false Chr05: 31530797-31535796 Eucalyptus grandis
Eucgr.K01960 10.0kb upstream 10.0kb upstream 15597 true Chr05: 31515200-31530796 Eucalyptus grandis
Eucgr.K01960 10.0kb upstream 10.0kb upstream 10000 false Chr05: 31515200-31525199 Eucalyptus grandis
Eucgr.K01960 10.0kb downstream 10.0kb downstream 15597 true Chr05: 31525200-31540796 Eucalyptus grandis
Eucgr.K01960 10.0kb downstream 10.0kb downstream 10000 false Chr05: 31530797-31540796 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063402 5270 Rosid View MSA
123748401 5271 Pentapetalae View MSA
122786472 5272 Eudicot View MSA
122047200 5273 Angiosperm View MSA
121351039 5274 Embryophyte View MSA
123427739 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0263793 0.0 0.146193 Low  
cufflinks 0.00651496 0.0 0.0648712 Low  
cufflinks 0.0927649 0.0 0.344843 Low  
cufflinks 0.00432579 0.0 0.0517847 Low Low
cufflinks 0.00946645 0.0 0.0796684 Low  
cufflinks 0.299583 0.0 0.953855 Low High

0 Strain