Gene : Eucgr.K01948 E. grandis v2.0
Defline:  (1 of 1) PTHR12965 - VACUOLAR PROTEIN SORTING 54 Genomic Order:  1684
Name:  ? Eucgr.K01948 Secondary Identifier:  ? PAC:32028071
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01948 0.5kb upstream 0.5kb upstream 21189 true Chr05: 31838363-31859551 Eucalyptus grandis
Eucgr.K01948 0.5kb upstream 0.5kb upstream 500 false Chr05: 31859052-31859551 Eucalyptus grandis
Eucgr.K01948 0.5kb downstream 0.5kb downstream 21189 true Chr05: 31837863-31859051 Eucalyptus grandis
Eucgr.K01948 0.5kb downstream 0.5kb downstream 500 false Chr05: 31837863-31838362 Eucalyptus grandis
Eucgr.K01948 1.0kb upstream 1.0kb upstream 21689 true Chr05: 31838363-31860051 Eucalyptus grandis
Eucgr.K01948 1.0kb upstream 1.0kb upstream 1000 false Chr05: 31859052-31860051 Eucalyptus grandis
Eucgr.K01948 1.0kb downstream 1.0kb downstream 21689 true Chr05: 31837363-31859051 Eucalyptus grandis
Eucgr.K01948 1.0kb downstream 1.0kb downstream 1000 false Chr05: 31837363-31838362 Eucalyptus grandis
Eucgr.K01948 2.0kb upstream 2.0kb upstream 22689 true Chr05: 31838363-31861051 Eucalyptus grandis
Eucgr.K01948 2.0kb upstream 2.0kb upstream 2000 false Chr05: 31859052-31861051 Eucalyptus grandis
Eucgr.K01948 2.0kb downstream 2.0kb downstream 22689 true Chr05: 31836363-31859051 Eucalyptus grandis
Eucgr.K01948 2.0kb downstream 2.0kb downstream 2000 false Chr05: 31836363-31838362 Eucalyptus grandis
Eucgr.K01948 5.0kb upstream 5.0kb upstream 25689 true Chr05: 31838363-31864051 Eucalyptus grandis
Eucgr.K01948 5.0kb upstream 5.0kb upstream 5000 false Chr05: 31859052-31864051 Eucalyptus grandis
Eucgr.K01948 5.0kb downstream 5.0kb downstream 25689 true Chr05: 31833363-31859051 Eucalyptus grandis
Eucgr.K01948 5.0kb downstream 5.0kb downstream 5000 false Chr05: 31833363-31838362 Eucalyptus grandis
Eucgr.K01948 10.0kb upstream 10.0kb upstream 30689 true Chr05: 31838363-31869051 Eucalyptus grandis
Eucgr.K01948 10.0kb upstream 10.0kb upstream 10000 false Chr05: 31859052-31869051 Eucalyptus grandis
Eucgr.K01948 10.0kb downstream 10.0kb downstream 30689 true Chr05: 31828363-31859051 Eucalyptus grandis
Eucgr.K01948 10.0kb downstream 10.0kb downstream 10000 false Chr05: 31828363-31838362 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068245 5270 Rosid View MSA
123740237 5271 Pentapetalae View MSA
122788545 5272 Eudicot View MSA
122042289 5273 Angiosperm View MSA
121346645 5274 Embryophyte View MSA
123425367 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.2513 0.0 24.9116    
cufflinks 13.2782 0.0 29.3648    
cufflinks 8.75022 0.0 19.4542   Low
cufflinks 21.1931 0.0 47.2593   High
cufflinks 11.5529 0.0 25.5663    
cufflinks 16.9032 0.0 37.4141    

0 Strain