Gene : Eucgr.E04343 E. grandis v2.0
Defline:  (1 of 2) PTHR12606//PTHR12606:SF29 - SENTRIN/SUMO-SPECIFIC PROTEASE Genomic Order:  3289
Name:  ? Eucgr.E04343 Secondary Identifier:  ? PAC:32031998
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E04343 0.5kb upstream 0.5kb upstream 1218 true Chr05: 75849674-75850891 Eucalyptus grandis
Eucgr.E04343 0.5kb upstream 0.5kb upstream 500 false Chr05: 75850392-75850891 Eucalyptus grandis
Eucgr.E04343 0.5kb downstream 0.5kb downstream 1218 true Chr05: 75849174-75850391 Eucalyptus grandis
Eucgr.E04343 0.5kb downstream 0.5kb downstream 500 false Chr05: 75849174-75849673 Eucalyptus grandis
Eucgr.E04343 1.0kb upstream 1.0kb upstream 1718 true Chr05: 75849674-75851391 Eucalyptus grandis
Eucgr.E04343 1.0kb upstream 1.0kb upstream 1000 false Chr05: 75850392-75851391 Eucalyptus grandis
Eucgr.E04343 1.0kb downstream 1.0kb downstream 1718 true Chr05: 75848674-75850391 Eucalyptus grandis
Eucgr.E04343 1.0kb downstream 1.0kb downstream 1000 false Chr05: 75848674-75849673 Eucalyptus grandis
Eucgr.E04343 2.0kb upstream 2.0kb upstream 2718 true Chr05: 75849674-75852391 Eucalyptus grandis
Eucgr.E04343 2.0kb upstream 2.0kb upstream 2000 false Chr05: 75850392-75852391 Eucalyptus grandis
Eucgr.E04343 2.0kb downstream 2.0kb downstream 2718 true Chr05: 75847674-75850391 Eucalyptus grandis
Eucgr.E04343 2.0kb downstream 2.0kb downstream 2000 false Chr05: 75847674-75849673 Eucalyptus grandis
Eucgr.E04343 5.0kb upstream 5.0kb upstream 5718 true Chr05: 75849674-75855391 Eucalyptus grandis
Eucgr.E04343 5.0kb upstream 5.0kb upstream 5000 false Chr05: 75850392-75855391 Eucalyptus grandis
Eucgr.E04343 5.0kb downstream 5.0kb downstream 5718 true Chr05: 75844674-75850391 Eucalyptus grandis
Eucgr.E04343 5.0kb downstream 5.0kb downstream 5000 false Chr05: 75844674-75849673 Eucalyptus grandis
Eucgr.E04343 10.0kb upstream 10.0kb upstream 10718 true Chr05: 75849674-75860391 Eucalyptus grandis
Eucgr.E04343 10.0kb upstream 10.0kb upstream 10000 false Chr05: 75850392-75860391 Eucalyptus grandis
Eucgr.E04343 10.0kb downstream 10.0kb downstream 10718 true Chr05: 75839674-75850391 Eucalyptus grandis
Eucgr.E04343 10.0kb downstream 10.0kb downstream 10000 false Chr05: 75839674-75849673 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073192 5270 Rosid View MSA
123753458 5271 Pentapetalae View MSA
122797598 5272 Eudicot View MSA
122051701 5273 Angiosperm View MSA
121312620 5274 Embryophyte View MSA
123349775 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain