Gene : Eucgr.E04317 E. grandis v2.0
Defline:  (1 of 4) PF14604 - Variant SH3 domain (SH3_9) Genomic Order:  3264
Name:  ? Eucgr.E04317 Secondary Identifier:  ? PAC:32030817
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E04317 0.5kb upstream 0.5kb upstream 18136 true Chr05: 75636815-75654950 Eucalyptus grandis
Eucgr.E04317 0.5kb upstream 0.5kb upstream 500 false Chr05: 75654451-75654950 Eucalyptus grandis
Eucgr.E04317 0.5kb downstream 0.5kb downstream 18136 true Chr05: 75636315-75654450 Eucalyptus grandis
Eucgr.E04317 0.5kb downstream 0.5kb downstream 500 false Chr05: 75636315-75636814 Eucalyptus grandis
Eucgr.E04317 1.0kb upstream 1.0kb upstream 18636 true Chr05: 75636815-75655450 Eucalyptus grandis
Eucgr.E04317 1.0kb upstream 1.0kb upstream 1000 false Chr05: 75654451-75655450 Eucalyptus grandis
Eucgr.E04317 1.0kb downstream 1.0kb downstream 18636 true Chr05: 75635815-75654450 Eucalyptus grandis
Eucgr.E04317 1.0kb downstream 1.0kb downstream 1000 false Chr05: 75635815-75636814 Eucalyptus grandis
Eucgr.E04317 2.0kb upstream 2.0kb upstream 19636 true Chr05: 75636815-75656450 Eucalyptus grandis
Eucgr.E04317 2.0kb upstream 2.0kb upstream 2000 false Chr05: 75654451-75656450 Eucalyptus grandis
Eucgr.E04317 2.0kb downstream 2.0kb downstream 19636 true Chr05: 75634815-75654450 Eucalyptus grandis
Eucgr.E04317 2.0kb downstream 2.0kb downstream 2000 false Chr05: 75634815-75636814 Eucalyptus grandis
Eucgr.E04317 5.0kb upstream 5.0kb upstream 22636 true Chr05: 75636815-75659450 Eucalyptus grandis
Eucgr.E04317 5.0kb upstream 5.0kb upstream 5000 false Chr05: 75654451-75659450 Eucalyptus grandis
Eucgr.E04317 5.0kb downstream 5.0kb downstream 22636 true Chr05: 75631815-75654450 Eucalyptus grandis
Eucgr.E04317 5.0kb downstream 5.0kb downstream 5000 false Chr05: 75631815-75636814 Eucalyptus grandis
Eucgr.E04317 10.0kb upstream 10.0kb upstream 27636 true Chr05: 75636815-75664450 Eucalyptus grandis
Eucgr.E04317 10.0kb upstream 10.0kb upstream 10000 false Chr05: 75654451-75664450 Eucalyptus grandis
Eucgr.E04317 10.0kb downstream 10.0kb downstream 27636 true Chr05: 75626815-75654450 Eucalyptus grandis
Eucgr.E04317 10.0kb downstream 10.0kb downstream 10000 false Chr05: 75626815-75636814 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068619 5270 Rosid View MSA
123739982 5271 Pentapetalae View MSA
122785695 5272 Eudicot View MSA
122044130 5273 Angiosperm View MSA
121348962 5274 Embryophyte View MSA
123428583 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.3962 0.0 25.6091    
cufflinks 15.9734 0.0 40.1398    
cufflinks 12.1083 0.0 27.2901    
cufflinks 22.7634 0.0 53.9895   High
cufflinks 8.3749 0.0 18.726   Low
cufflinks 18.423 0.0 42.454    

0 Strain