Gene : Eucgr.E04242 E. grandis v2.0
Defline:  (1 of 1) PTHR10589//PTHR10589:SF30 - UBIQUITIN CARBOXYL-TERMINAL HYDROLASE Genomic Order:  3202
Name:  ? Eucgr.E04242 Secondary Identifier:  ? PAC:32030896
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E04242 0.5kb upstream 0.5kb upstream 5428 true Chr05: 75035196-75040623 Eucalyptus grandis
Eucgr.E04242 0.5kb upstream 0.5kb upstream 500 false Chr05: 75040124-75040623 Eucalyptus grandis
Eucgr.E04242 0.5kb downstream 0.5kb downstream 5428 true Chr05: 75034696-75040123 Eucalyptus grandis
Eucgr.E04242 0.5kb downstream 0.5kb downstream 500 false Chr05: 75034696-75035195 Eucalyptus grandis
Eucgr.E04242 1.0kb upstream 1.0kb upstream 5928 true Chr05: 75035196-75041123 Eucalyptus grandis
Eucgr.E04242 1.0kb upstream 1.0kb upstream 1000 false Chr05: 75040124-75041123 Eucalyptus grandis
Eucgr.E04242 1.0kb downstream 1.0kb downstream 5928 true Chr05: 75034196-75040123 Eucalyptus grandis
Eucgr.E04242 1.0kb downstream 1.0kb downstream 1000 false Chr05: 75034196-75035195 Eucalyptus grandis
Eucgr.E04242 2.0kb upstream 2.0kb upstream 6928 true Chr05: 75035196-75042123 Eucalyptus grandis
Eucgr.E04242 2.0kb upstream 2.0kb upstream 2000 false Chr05: 75040124-75042123 Eucalyptus grandis
Eucgr.E04242 2.0kb downstream 2.0kb downstream 6928 true Chr05: 75033196-75040123 Eucalyptus grandis
Eucgr.E04242 2.0kb downstream 2.0kb downstream 2000 false Chr05: 75033196-75035195 Eucalyptus grandis
Eucgr.E04242 5.0kb upstream 5.0kb upstream 9928 true Chr05: 75035196-75045123 Eucalyptus grandis
Eucgr.E04242 5.0kb upstream 5.0kb upstream 5000 false Chr05: 75040124-75045123 Eucalyptus grandis
Eucgr.E04242 5.0kb downstream 5.0kb downstream 9928 true Chr05: 75030196-75040123 Eucalyptus grandis
Eucgr.E04242 5.0kb downstream 5.0kb downstream 5000 false Chr05: 75030196-75035195 Eucalyptus grandis
Eucgr.E04242 10.0kb upstream 10.0kb upstream 14928 true Chr05: 75035196-75050123 Eucalyptus grandis
Eucgr.E04242 10.0kb upstream 10.0kb upstream 10000 false Chr05: 75040124-75050123 Eucalyptus grandis
Eucgr.E04242 10.0kb downstream 10.0kb downstream 14928 true Chr05: 75025196-75040123 Eucalyptus grandis
Eucgr.E04242 10.0kb downstream 10.0kb downstream 10000 false Chr05: 75025196-75035195 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068259 5270 Rosid View MSA
123738653 5271 Pentapetalae View MSA
122786762 5272 Eudicot View MSA
122047497 5273 Angiosperm View MSA
121350300 5274 Embryophyte View MSA
123424005 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.6622 0.0 53.3788    
cufflinks 17.9305 0.0 40.7409    
cufflinks 18.4274 0.0 41.7503    
cufflinks 24.5229 0.0 55.3796   High
cufflinks 18.172 0.0 41.1792    
cufflinks 22.8094 0.0 51.2354    

0 Strain