Gene : Eucgr.F00419 E. grandis v2.0
Defline:  (1 of 2) PTHR24078:SF259 - CHAPERONE DNAJ-DOMAIN CONTAINING PROTEIN Genomic Order:  293
Name:  ? Eucgr.F00419 Secondary Identifier:  ? PAC:32055032
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F00419 0.5kb upstream 0.5kb upstream 1937 true Chr06: 4650733-4652669 Eucalyptus grandis
Eucgr.F00419 0.5kb upstream 0.5kb upstream 500 false Chr06: 4650733-4651232 Eucalyptus grandis
Eucgr.F00419 0.5kb downstream 0.5kb downstream 1937 true Chr06: 4651233-4653169 Eucalyptus grandis
Eucgr.F00419 0.5kb downstream 0.5kb downstream 500 false Chr06: 4652670-4653169 Eucalyptus grandis
Eucgr.F00419 1.0kb upstream 1.0kb upstream 2437 true Chr06: 4650233-4652669 Eucalyptus grandis
Eucgr.F00419 1.0kb upstream 1.0kb upstream 1000 false Chr06: 4650233-4651232 Eucalyptus grandis
Eucgr.F00419 1.0kb downstream 1.0kb downstream 2437 true Chr06: 4651233-4653669 Eucalyptus grandis
Eucgr.F00419 1.0kb downstream 1.0kb downstream 1000 false Chr06: 4652670-4653669 Eucalyptus grandis
Eucgr.F00419 2.0kb upstream 2.0kb upstream 3437 true Chr06: 4649233-4652669 Eucalyptus grandis
Eucgr.F00419 2.0kb upstream 2.0kb upstream 2000 false Chr06: 4649233-4651232 Eucalyptus grandis
Eucgr.F00419 2.0kb downstream 2.0kb downstream 3437 true Chr06: 4651233-4654669 Eucalyptus grandis
Eucgr.F00419 2.0kb downstream 2.0kb downstream 2000 false Chr06: 4652670-4654669 Eucalyptus grandis
Eucgr.F00419 5.0kb upstream 5.0kb upstream 6437 true Chr06: 4646233-4652669 Eucalyptus grandis
Eucgr.F00419 5.0kb upstream 5.0kb upstream 5000 false Chr06: 4646233-4651232 Eucalyptus grandis
Eucgr.F00419 5.0kb downstream 5.0kb downstream 6437 true Chr06: 4651233-4657669 Eucalyptus grandis
Eucgr.F00419 5.0kb downstream 5.0kb downstream 5000 false Chr06: 4652670-4657669 Eucalyptus grandis
Eucgr.F00419 10.0kb upstream 10.0kb upstream 11437 true Chr06: 4641233-4652669 Eucalyptus grandis
Eucgr.F00419 10.0kb upstream 10.0kb upstream 10000 false Chr06: 4641233-4651232 Eucalyptus grandis
Eucgr.F00419 10.0kb downstream 10.0kb downstream 11437 true Chr06: 4651233-4662669 Eucalyptus grandis
Eucgr.F00419 10.0kb downstream 10.0kb downstream 10000 false Chr06: 4652670-4662669 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068079 5270 Rosid View MSA
123751398 5271 Pentapetalae View MSA
122797232 5272 Eudicot View MSA
122050923 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121349574 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.0612 0.0 31.8796    
cufflinks 26.959 0.0 59.8555   High
cufflinks 14.3585 0.0 32.7097    
cufflinks 18.2414 0.0 41.0333    
cufflinks 19.1798 0.0 43.0031    
cufflinks 12.5008 0.0 28.3305   Low

0 Strain