Gene : Eucgr.F00329 E. grandis v2.0
Defline:  (1 of 1) PTHR10992:SF837 - ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN Genomic Order:  374
Name:  ? Eucgr.F00329 Secondary Identifier:  ? PAC:32054745
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis LIPAS-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F00329 0.5kb upstream 0.5kb upstream 3292 true Chr06: 5431453-5434744 Eucalyptus grandis
Eucgr.F00329 0.5kb upstream 0.5kb upstream 500 false Chr06: 5434245-5434744 Eucalyptus grandis
Eucgr.F00329 0.5kb downstream 0.5kb downstream 3292 true Chr06: 5430953-5434244 Eucalyptus grandis
Eucgr.F00329 0.5kb downstream 0.5kb downstream 500 false Chr06: 5430953-5431452 Eucalyptus grandis
Eucgr.F00329 1.0kb upstream 1.0kb upstream 3792 true Chr06: 5431453-5435244 Eucalyptus grandis
Eucgr.F00329 1.0kb upstream 1.0kb upstream 1000 false Chr06: 5434245-5435244 Eucalyptus grandis
Eucgr.F00329 1.0kb downstream 1.0kb downstream 3792 true Chr06: 5430453-5434244 Eucalyptus grandis
Eucgr.F00329 1.0kb downstream 1.0kb downstream 1000 false Chr06: 5430453-5431452 Eucalyptus grandis
Eucgr.F00329 2.0kb upstream 2.0kb upstream 4792 true Chr06: 5431453-5436244 Eucalyptus grandis
Eucgr.F00329 2.0kb upstream 2.0kb upstream 2000 false Chr06: 5434245-5436244 Eucalyptus grandis
Eucgr.F00329 2.0kb downstream 2.0kb downstream 4792 true Chr06: 5429453-5434244 Eucalyptus grandis
Eucgr.F00329 2.0kb downstream 2.0kb downstream 2000 false Chr06: 5429453-5431452 Eucalyptus grandis
Eucgr.F00329 5.0kb upstream 5.0kb upstream 7792 true Chr06: 5431453-5439244 Eucalyptus grandis
Eucgr.F00329 5.0kb upstream 5.0kb upstream 5000 false Chr06: 5434245-5439244 Eucalyptus grandis
Eucgr.F00329 5.0kb downstream 5.0kb downstream 7792 true Chr06: 5426453-5434244 Eucalyptus grandis
Eucgr.F00329 5.0kb downstream 5.0kb downstream 5000 false Chr06: 5426453-5431452 Eucalyptus grandis
Eucgr.F00329 10.0kb upstream 10.0kb upstream 12792 true Chr06: 5431453-5444244 Eucalyptus grandis
Eucgr.F00329 10.0kb upstream 10.0kb upstream 10000 false Chr06: 5434245-5444244 Eucalyptus grandis
Eucgr.F00329 10.0kb downstream 10.0kb downstream 12792 true Chr06: 5421453-5434244 Eucalyptus grandis
Eucgr.F00329 10.0kb downstream 10.0kb downstream 10000 false Chr06: 5421453-5431452 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070753 5270 Rosid View MSA
123749753 5271 Pentapetalae View MSA
122790165 5272 Eudicot View MSA
122050369 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121351643 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.0482 0.0 53.461   High
cufflinks 2.55213 0.0 20.1254    
cufflinks 10.3073 0.0 44.8784    
cufflinks 1.07256 0.0 12.6018   Low
cufflinks 3.192 0.0 23.591    
cufflinks 8.47891 0.0 36.7758    

0 Strain