Gene : Eucgr.F00298 E. grandis v2.0
Defline:  (1 of 2) PTHR10788:SF25 - TREHALOSE-PHOSPHATE PHOSPHATASE D-RELATED Genomic Order:  400
Name:  ? Eucgr.F00298 Secondary Identifier:  ? PAC:32052981
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F00298 0.5kb upstream 0.5kb upstream 3532 true Chr06: 5720617-5724148 Eucalyptus grandis
Eucgr.F00298 0.5kb upstream 0.5kb upstream 500 false Chr06: 5723649-5724148 Eucalyptus grandis
Eucgr.F00298 0.5kb downstream 0.5kb downstream 3532 true Chr06: 5720117-5723648 Eucalyptus grandis
Eucgr.F00298 0.5kb downstream 0.5kb downstream 500 false Chr06: 5720117-5720616 Eucalyptus grandis
Eucgr.F00298 1.0kb upstream 1.0kb upstream 4032 true Chr06: 5720617-5724648 Eucalyptus grandis
Eucgr.F00298 1.0kb upstream 1.0kb upstream 1000 false Chr06: 5723649-5724648 Eucalyptus grandis
Eucgr.F00298 1.0kb downstream 1.0kb downstream 4032 true Chr06: 5719617-5723648 Eucalyptus grandis
Eucgr.F00298 1.0kb downstream 1.0kb downstream 1000 false Chr06: 5719617-5720616 Eucalyptus grandis
Eucgr.F00298 2.0kb upstream 2.0kb upstream 5032 true Chr06: 5720617-5725648 Eucalyptus grandis
Eucgr.F00298 2.0kb upstream 2.0kb upstream 2000 false Chr06: 5723649-5725648 Eucalyptus grandis
Eucgr.F00298 2.0kb downstream 2.0kb downstream 5032 true Chr06: 5718617-5723648 Eucalyptus grandis
Eucgr.F00298 2.0kb downstream 2.0kb downstream 2000 false Chr06: 5718617-5720616 Eucalyptus grandis
Eucgr.F00298 5.0kb upstream 5.0kb upstream 8032 true Chr06: 5720617-5728648 Eucalyptus grandis
Eucgr.F00298 5.0kb upstream 5.0kb upstream 5000 false Chr06: 5723649-5728648 Eucalyptus grandis
Eucgr.F00298 5.0kb downstream 5.0kb downstream 8032 true Chr06: 5715617-5723648 Eucalyptus grandis
Eucgr.F00298 5.0kb downstream 5.0kb downstream 5000 false Chr06: 5715617-5720616 Eucalyptus grandis
Eucgr.F00298 10.0kb upstream 10.0kb upstream 13032 true Chr06: 5720617-5733648 Eucalyptus grandis
Eucgr.F00298 10.0kb upstream 10.0kb upstream 10000 false Chr06: 5723649-5733648 Eucalyptus grandis
Eucgr.F00298 10.0kb downstream 10.0kb downstream 13032 true Chr06: 5710617-5723648 Eucalyptus grandis
Eucgr.F00298 10.0kb downstream 10.0kb downstream 10000 false Chr06: 5710617-5720616 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069564 5270 Rosid View MSA
123746966 5271 Pentapetalae View MSA
122786046 5272 Eudicot View MSA
122042129 5273 Angiosperm View MSA
121351669 5274 Embryophyte View MSA
123427869 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.138334 0.0 0.517268 Low Low
cufflinks 4.7032 0.0 11.699   High
cufflinks 0.847524 0.0 2.51889    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.839921 0.0 2.48329    

0 Strain