Gene : Eucgr.F00318 E. grandis v2.0
Defline:  (1 of 2) PTHR23147//PTHR23147:SF10 - SERINE/ARGININE RICH SPLICING FACTOR Genomic Order:  384
Name:  ? Eucgr.F00318 Secondary Identifier:  ? PAC:32056411
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F00318 0.5kb upstream 0.5kb upstream 4571 true Chr06: 5538731-5543301 Eucalyptus grandis
Eucgr.F00318 0.5kb upstream 0.5kb upstream 500 false Chr06: 5538731-5539230 Eucalyptus grandis
Eucgr.F00318 0.5kb downstream 0.5kb downstream 4571 true Chr06: 5539231-5543801 Eucalyptus grandis
Eucgr.F00318 0.5kb downstream 0.5kb downstream 500 false Chr06: 5543302-5543801 Eucalyptus grandis
Eucgr.F00318 1.0kb upstream 1.0kb upstream 5071 true Chr06: 5538231-5543301 Eucalyptus grandis
Eucgr.F00318 1.0kb upstream 1.0kb upstream 1000 false Chr06: 5538231-5539230 Eucalyptus grandis
Eucgr.F00318 1.0kb downstream 1.0kb downstream 5071 true Chr06: 5539231-5544301 Eucalyptus grandis
Eucgr.F00318 1.0kb downstream 1.0kb downstream 1000 false Chr06: 5543302-5544301 Eucalyptus grandis
Eucgr.F00318 2.0kb upstream 2.0kb upstream 6071 true Chr06: 5537231-5543301 Eucalyptus grandis
Eucgr.F00318 2.0kb upstream 2.0kb upstream 2000 false Chr06: 5537231-5539230 Eucalyptus grandis
Eucgr.F00318 2.0kb downstream 2.0kb downstream 6071 true Chr06: 5539231-5545301 Eucalyptus grandis
Eucgr.F00318 2.0kb downstream 2.0kb downstream 2000 false Chr06: 5543302-5545301 Eucalyptus grandis
Eucgr.F00318 5.0kb upstream 5.0kb upstream 9071 true Chr06: 5534231-5543301 Eucalyptus grandis
Eucgr.F00318 5.0kb upstream 5.0kb upstream 5000 false Chr06: 5534231-5539230 Eucalyptus grandis
Eucgr.F00318 5.0kb downstream 5.0kb downstream 9071 true Chr06: 5539231-5548301 Eucalyptus grandis
Eucgr.F00318 5.0kb downstream 5.0kb downstream 5000 false Chr06: 5543302-5548301 Eucalyptus grandis
Eucgr.F00318 10.0kb upstream 10.0kb upstream 14071 true Chr06: 5529231-5543301 Eucalyptus grandis
Eucgr.F00318 10.0kb upstream 10.0kb upstream 10000 false Chr06: 5529231-5539230 Eucalyptus grandis
Eucgr.F00318 10.0kb downstream 10.0kb downstream 14071 true Chr06: 5539231-5553301 Eucalyptus grandis
Eucgr.F00318 10.0kb downstream 10.0kb downstream 10000 false Chr06: 5543302-5553301 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060793 5270 Rosid View MSA
123748547 5271 Pentapetalae View MSA
122794184 5272 Eudicot View MSA
122049449 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121351469 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 43.4613 0.0 98.4763 High  
cufflinks 29.0546 0.0 70.3372   Low
cufflinks 39.9619 0.0 100.862 High  
cufflinks 39.1415 0.0 98.1266 High  
cufflinks 49.3917 0.0 123.237 High High
cufflinks 28.0618 0.0 62.9295   Low

0 Strain