Gene : Eucgr.F00271 E. grandis v2.0
Defline:  (1 of 10) PTHR11206:SF102 - MATE EFFLUX FAMILY PROTEIN Genomic Order:  419
Name:  ? Eucgr.F00271 Secondary Identifier:  ? PAC:32055871
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F00271 0.5kb upstream 0.5kb upstream 3373 true Chr06: 6003296-6006668 Eucalyptus grandis
Eucgr.F00271 0.5kb upstream 0.5kb upstream 500 false Chr06: 6003296-6003795 Eucalyptus grandis
Eucgr.F00271 0.5kb downstream 0.5kb downstream 3373 true Chr06: 6003796-6007168 Eucalyptus grandis
Eucgr.F00271 0.5kb downstream 0.5kb downstream 500 false Chr06: 6006669-6007168 Eucalyptus grandis
Eucgr.F00271 1.0kb upstream 1.0kb upstream 3873 true Chr06: 6002796-6006668 Eucalyptus grandis
Eucgr.F00271 1.0kb upstream 1.0kb upstream 1000 false Chr06: 6002796-6003795 Eucalyptus grandis
Eucgr.F00271 1.0kb downstream 1.0kb downstream 3873 true Chr06: 6003796-6007668 Eucalyptus grandis
Eucgr.F00271 1.0kb downstream 1.0kb downstream 1000 false Chr06: 6006669-6007668 Eucalyptus grandis
Eucgr.F00271 2.0kb upstream 2.0kb upstream 4873 true Chr06: 6001796-6006668 Eucalyptus grandis
Eucgr.F00271 2.0kb upstream 2.0kb upstream 2000 false Chr06: 6001796-6003795 Eucalyptus grandis
Eucgr.F00271 2.0kb downstream 2.0kb downstream 4873 true Chr06: 6003796-6008668 Eucalyptus grandis
Eucgr.F00271 2.0kb downstream 2.0kb downstream 2000 false Chr06: 6006669-6008668 Eucalyptus grandis
Eucgr.F00271 5.0kb upstream 5.0kb upstream 7873 true Chr06: 5998796-6006668 Eucalyptus grandis
Eucgr.F00271 5.0kb upstream 5.0kb upstream 5000 false Chr06: 5998796-6003795 Eucalyptus grandis
Eucgr.F00271 5.0kb downstream 5.0kb downstream 7873 true Chr06: 6003796-6011668 Eucalyptus grandis
Eucgr.F00271 5.0kb downstream 5.0kb downstream 5000 false Chr06: 6006669-6011668 Eucalyptus grandis
Eucgr.F00271 10.0kb upstream 10.0kb upstream 12873 true Chr06: 5993796-6006668 Eucalyptus grandis
Eucgr.F00271 10.0kb upstream 10.0kb upstream 10000 false Chr06: 5993796-6003795 Eucalyptus grandis
Eucgr.F00271 10.0kb downstream 10.0kb downstream 12873 true Chr06: 6003796-6016668 Eucalyptus grandis
Eucgr.F00271 10.0kb downstream 10.0kb downstream 10000 false Chr06: 6006669-6016668 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066814 5270 Rosid View MSA
123744477 5271 Pentapetalae View MSA
122791192 5272 Eudicot View MSA
122050429 5273 Angiosperm View MSA
121311902 5274 Embryophyte View MSA
123349133 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.112978 0.0 0.49593 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.265246 0.0 0.963025 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain