Gene : Eucgr.F00055 E. grandis v2.0
Defline:  (1 of 8) PTHR20855//PTHR20855:SF32 - ADIPOR/PROGESTIN RECEPTOR-RELATED Genomic Order:  47
Name:  ? Eucgr.F00055 Secondary Identifier:  ? PAC:32057344
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F00055 0.5kb upstream 0.5kb upstream 2909 true Chr06: 1163070-1165978 Eucalyptus grandis
Eucgr.F00055 0.5kb upstream 0.5kb upstream 500 false Chr06: 1163070-1163569 Eucalyptus grandis
Eucgr.F00055 0.5kb downstream 0.5kb downstream 2909 true Chr06: 1163570-1166478 Eucalyptus grandis
Eucgr.F00055 0.5kb downstream 0.5kb downstream 500 false Chr06: 1165979-1166478 Eucalyptus grandis
Eucgr.F00055 1.0kb upstream 1.0kb upstream 3409 true Chr06: 1162570-1165978 Eucalyptus grandis
Eucgr.F00055 1.0kb upstream 1.0kb upstream 1000 false Chr06: 1162570-1163569 Eucalyptus grandis
Eucgr.F00055 1.0kb downstream 1.0kb downstream 3409 true Chr06: 1163570-1166978 Eucalyptus grandis
Eucgr.F00055 1.0kb downstream 1.0kb downstream 1000 false Chr06: 1165979-1166978 Eucalyptus grandis
Eucgr.F00055 2.0kb upstream 2.0kb upstream 4409 true Chr06: 1161570-1165978 Eucalyptus grandis
Eucgr.F00055 2.0kb upstream 2.0kb upstream 2000 false Chr06: 1161570-1163569 Eucalyptus grandis
Eucgr.F00055 2.0kb downstream 2.0kb downstream 4409 true Chr06: 1163570-1167978 Eucalyptus grandis
Eucgr.F00055 2.0kb downstream 2.0kb downstream 2000 false Chr06: 1165979-1167978 Eucalyptus grandis
Eucgr.F00055 5.0kb upstream 5.0kb upstream 7409 true Chr06: 1158570-1165978 Eucalyptus grandis
Eucgr.F00055 5.0kb upstream 5.0kb upstream 5000 false Chr06: 1158570-1163569 Eucalyptus grandis
Eucgr.F00055 5.0kb downstream 5.0kb downstream 7409 true Chr06: 1163570-1170978 Eucalyptus grandis
Eucgr.F00055 5.0kb downstream 5.0kb downstream 5000 false Chr06: 1165979-1170978 Eucalyptus grandis
Eucgr.F00055 10.0kb upstream 10.0kb upstream 12409 true Chr06: 1153570-1165978 Eucalyptus grandis
Eucgr.F00055 10.0kb upstream 10.0kb upstream 10000 false Chr06: 1153570-1163569 Eucalyptus grandis
Eucgr.F00055 10.0kb downstream 10.0kb downstream 12409 true Chr06: 1163570-1175978 Eucalyptus grandis
Eucgr.F00055 10.0kb downstream 10.0kb downstream 10000 false Chr06: 1165979-1175978 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066042 5270 Rosid View MSA
123752354 5271 Pentapetalae View MSA
122795335 5272 Eudicot View MSA
122047253 5273 Angiosperm View MSA
121349872 5274 Embryophyte View MSA
123428275 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.702161 0.0 2.29893   Low
cufflinks 1.33242 0.0 3.98069    
cufflinks 1.71029 0.0 5.0279    
cufflinks 4.11639 0.0 10.9865   High
cufflinks 1.04424 0.0 3.2299    
cufflinks 2.63254 0.0 7.42596    

0 Strain