Gene : Eucgr.F01005 E. grandis v2.0
Defline:  (1 of 7) PTHR24064:SF292 - ORGANIC CATION/CARNITINE TRANSPORTER 4 Genomic Order:  885
Name:  ? Eucgr.F01005 Secondary Identifier:  ? PAC:32057361
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01005 0.5kb upstream 0.5kb upstream 4954 true Chr06: 14201422-14206375 Eucalyptus grandis
Eucgr.F01005 0.5kb upstream 0.5kb upstream 500 false Chr06: 14201422-14201921 Eucalyptus grandis
Eucgr.F01005 0.5kb downstream 0.5kb downstream 4954 true Chr06: 14201922-14206875 Eucalyptus grandis
Eucgr.F01005 0.5kb downstream 0.5kb downstream 500 false Chr06: 14206376-14206875 Eucalyptus grandis
Eucgr.F01005 1.0kb upstream 1.0kb upstream 5454 true Chr06: 14200922-14206375 Eucalyptus grandis
Eucgr.F01005 1.0kb upstream 1.0kb upstream 1000 false Chr06: 14200922-14201921 Eucalyptus grandis
Eucgr.F01005 1.0kb downstream 1.0kb downstream 5454 true Chr06: 14201922-14207375 Eucalyptus grandis
Eucgr.F01005 1.0kb downstream 1.0kb downstream 1000 false Chr06: 14206376-14207375 Eucalyptus grandis
Eucgr.F01005 2.0kb upstream 2.0kb upstream 6454 true Chr06: 14199922-14206375 Eucalyptus grandis
Eucgr.F01005 2.0kb upstream 2.0kb upstream 2000 false Chr06: 14199922-14201921 Eucalyptus grandis
Eucgr.F01005 2.0kb downstream 2.0kb downstream 6454 true Chr06: 14201922-14208375 Eucalyptus grandis
Eucgr.F01005 2.0kb downstream 2.0kb downstream 2000 false Chr06: 14206376-14208375 Eucalyptus grandis
Eucgr.F01005 5.0kb upstream 5.0kb upstream 9454 true Chr06: 14196922-14206375 Eucalyptus grandis
Eucgr.F01005 5.0kb upstream 5.0kb upstream 5000 false Chr06: 14196922-14201921 Eucalyptus grandis
Eucgr.F01005 5.0kb downstream 5.0kb downstream 9454 true Chr06: 14201922-14211375 Eucalyptus grandis
Eucgr.F01005 5.0kb downstream 5.0kb downstream 5000 false Chr06: 14206376-14211375 Eucalyptus grandis
Eucgr.F01005 10.0kb upstream 10.0kb upstream 14454 true Chr06: 14191922-14206375 Eucalyptus grandis
Eucgr.F01005 10.0kb upstream 10.0kb upstream 10000 false Chr06: 14191922-14201921 Eucalyptus grandis
Eucgr.F01005 10.0kb downstream 10.0kb downstream 14454 true Chr06: 14201922-14216375 Eucalyptus grandis
Eucgr.F01005 10.0kb downstream 10.0kb downstream 10000 false Chr06: 14206376-14216375 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068982 5270 Rosid View MSA
123739056 5271 Pentapetalae View MSA
122792351 5272 Eudicot View MSA
122045653 5273 Angiosperm View MSA
123429172 5275 Viridiplantae View MSA
121351070 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.47784 0.0 4.01632    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.557179 0.0 1.68601   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.99156 0.0 5.25622    

0 Strain